Carya illinoinensis (pecan): 122289742
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Entry
122289742 CDS
T08745
Name
(RefSeq) ABC transporter B family member 2-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
122289742
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cill02000
]
122289742
04147 Exosome [BR:
cill04147
]
122289742
04090 CD molecules [BR:
cill04090
]
122289742
Enzymes [BR:
cill01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
122289742
Transporters [BR:
cill02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
122289742
Exosome [BR:
cill04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
122289742
CD molecules [BR:
cill04090
]
Proteins
122289742
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_29
Zeta_toxin
AAA_22
AAA_16
RsgA_GTPase
AAA_15
AAA_21
DUF87
nSTAND1
NTPase_1
Gtr1_RagA
DUF815
Motif
Other DBs
NCBI-GeneID:
122289742
NCBI-ProteinID:
XP_042952921
LinkDB
All DBs
Position
12:complement(23960249..23970258)
Genome browser
AA seq
1252 aa
AA seq
DB search
MTDEPGTSFSVKNDVTDDMKKKKKKKDQDQEKHPQSVPLLKLFTFADFYDYILMAIGSFG
ACVHGASVPVFFIFFGKLINVIGMAYLFPKEASHKVAKYSLDFVYLSIAILFSSWTEVAC
WMHTGERQAAKMRMAYLRSMLNQDISVFDTESSTGEVIAAITSDIIIVQDALSEKVGNFI
HYISRFIAGFIIGFVRVWQISLVTLSIVPLIAVAGGLYAWVATGLIARVRKSYVKAGEIA
EEVIGNVRTVQAFAGEEKAVRSYLTALTNTYNYGRKTGLAKGLGLGSMHCVLFLSWALLV
WFTSIVVHKKIANGGESFTTMLNVVISGLSLGLAAPDITAFVRAKTAAYPIFEMIERDTM
SKTSSKTGQKLGRLEGHIQFKNVSFSYPSRQDVVIFNNLCLDIPPGKVLALVGGSGSGKS
TVISLIERFYEPLSGEILLDGHDIRGLDLKWLRQQIGLVNQEPALFATTIRENILYGKDD
ATLEEITRAAKLSEALSFINNLPDRFETQVGERGIQLSGGQKQRIAISRAILKNPSILLL
DEATSALDAESEKSVQEALDRVMVGRTTVVVAHRLSTIRNADAIAVVQGGEVIETGNHEE
LISNPNSAYASLVQLQESGTMQRYPSLGRPPSLRFSRELSRTTASFGASFRSDKESVGRF
GADGGETVKSKRVSAKRLYSMVGPDWVYGAVGTLCAFIAGAQMPLFALGVSQALVSYYMD
WDTTRHEVKKITLLFCGAAFITVIVHAIEHLSFGIMGERLTLRVREMMFSSILRNEIGWF
DDTNNTSSMLSSRLESDATLLRTIVVDRSSILLQNVGLVVASFIISFILNWRITLVVIAT
YPLIICGHISEKIFMKGYGGNLSKAYLKANMLAAEAVSNVRTVAAFCAEDKILDLYAREL
IEPSRRSFVRGQISGIFYGICQFFIFSSYGLALWYGSVLMGKGLASFKSVMKAFFVLIVT
ALAMGETLAMAPDLLKGNQMVASVFEVMDRKTEVLGDVGEELMTVEGTIEFRGVQFSYPS
RPEVLIFKDFNLRVRSGKSMALVGQSGSGKSSVISLILRFYDPTAGRVMIDGKDIKKLKI
KSLRRHIGLVQQEPALFATSIYENILYGKEGASEAEVIEATKLANAHTFVSSLPEGYSTK
VGERGVQLSGGQRQRVAIARAILKNPEILLLDEATSALDVESERVVQQALDRLMKNRTTV
VVAHRLSTIKNADQISVLNDGKIIEQGTHSSLIENKNGAYYKLINIQQQQQQ
NT seq
3759 nt
NT seq
+upstream
nt +downstream
nt
atgacagacgagccgggtacctcattttctgtcaaaaacgatgtcactgatgatatgaag
aaaaagaagaagaagaaagatcaagatcaggaaaagcatccgcagtcggttccactgcta
aaactatttacatttgcagacttttatgattatattttgatggcaatcggatcatttggt
gcatgtgttcatggcgcttcggtgcctgtattctttattttctttgggaagttgataaat
gttattggaatggcttatctcttccccaaagaagcttcccataaagttgccaagtattca
ctggattttgtgtatctcagtatagctatattgttttcctcatggacagaggtggcttgt
tggatgcatactggggaaaggcaagcggcaaagatgagaatggcatatttgaggtccatg
ctaaatcaagacattagtgtctttgacactgaatcatccaccggtgaggtcattgccgca
attacaagtgacattatcattgttcaggatgccctttctgagaaggtggggaacttcata
cactacattagcaggtttatagcaggcttcataattggatttgttagggtctggcaaatc
tctctagtaacactgtctatagtccctttaattgccgttgctggtggcctctatgcttgg
gtggcaactggcctcattgccagagttcgaaaatcctatgtcaaggcgggtgagattgct
gaagaggtgattggaaatgttagaacagtccaagcatttgcaggagaagagaaagcagtg
agatcgtatttgactgctctcacaaatacatacaattatgggagaaaaacaggattagcc
aaagggctaggactaggctctatgcactgcgtccttttcctgtcatgggcattgcttgtt
tggttcactagcattgttgttcacaagaaaattgccaatggtggggaatccttcaccacc
atgctcaatgttgttatatctggcctgtcactggggttggcagcaccagacatcactgct
tttgtccgagctaagacagcagcctatcccatatttgagatgatagagagggacacgatg
agcaaaaccagctccaagacagggcagaaactgggcagactagagggccacattcagttt
aagaatgtgtcttttagctacccatctcgtcaagatgtagttatcttcaataatctgtgc
ctggacatccctcctggaaaggttttagcccttgtgggaggaagtgggtctggaaagagc
acagtaatatctttgatcgaaaggttctatgagcccctttctggggagatacttttagat
gggcacgatatcagaggcctagacctcaagtggctgaggcagcaaattggcttggtaaat
caggagcctgcactttttgctacaaccattagggagaacatactctatggaaaggatgat
gccactcttgaagagatcacgcgtgcggctaaactttctgaggccctctcttttataaac
aacctgcccgacagatttgagactcaggttggtgagagaggaatacaactttcaggtggg
caaaagcaaaggattgcaatatcccgagcaatactaaagaacccatccatccttttacta
gacgaagcaacgagtgcactagatgctgagtctgagaagagtgtacaggaggcacttgat
cgtgtcatggtcggacgaacaactgtagtggtggcccatcggctttctaccattagaaat
gcagatgcgatcgcagtcgtacaaggaggagaggtaatagaaactgggaatcatgaagag
ttgatttcaaacccaaacagtgcctatgcatcacttgttcaactccaagagtcaggtacc
atgcaacgctacccctcattgggacgcccaccaagcttgaggttctcacgggaactatcc
cgcaccacagcaagctttggtgctagttttcgttctgataaagaatctgtcggccgtttt
ggtgctgatggaggggagactgtgaagtcgaaaagggtttccgctaaaaggctatattcg
atggttggtccagactgggtttatggagcagttggcaccctgtgtgcgtttattgctgga
gctcagatgccccttttcgctcttggggtgtctcaggcacttgtttcatattacatggat
tgggacacaacacgtcatgaggtcaagaagattaccctgttattctgtggcgctgcattt
ataacagtcattgttcatgcaattgagcatctgtctttcggaatcatgggagagcgactc
actcttcgtgtgcgggagatgatgttttcttccattttgaggaatgagattggatggttt
gatgacacgaacaacacaagttctatgctttcatcgcgtctagaaagtgatgctactctg
ttacgaactatagttgttgatcgaagttcaattcttttacagaatgtaggattggttgtt
gcctcatttatcatttccttcatcttgaactggaggatcacacttgttgtcattgccaca
tacccattgatcatttgtggtcacatcagcgagaaaattttcatgaaaggctatggtggc
aacttgagcaaagcctatcttaaagctaacatgctggctgcagaggctgtgagtaacgtc
cgaactgttgctgcattttgtgctgaggataagatccttgacctatatgctcgtgaactc
attgagccttctaggcgttcatttgttcgtggccagatttctggcatattctatgggata
tgccagttcttcatcttctcatcctatggcctggccttatggtatggctctgttttgatg
gggaaggggcttgctagcttcaaatctgtcatgaaagcattcttcgttctgatagtaacg
gcattagctatgggcgagacattggctatggccccagatctcttgaagggaaaccaaatg
gtggcatcagtctttgaagtgatggacagaaagacagaggtactgggggatgttggagaa
gagctgatgacagtggagggaacaattgagtttaggggcgtccaattcagttacccatca
agaccagaagttctcatttttaaggactttaatctaagagttcgttcggggaagagtatg
gcactagtggggcaaagtggttctggtaaaagctctgtcatctctcttatactgcgattt
tatgatccaacggctgggagagttatgatagatgggaaagacatcaagaagctcaagatc
aaatcacttaggagacacattggtctagtccaacaagaaccagcccttttcgccacatca
atatatgagaacattctttatggaaaagaaggagcctctgaagcggaagtaattgaagca
acaaagcttgctaatgctcatacctttgtcagttcgcttcctgaaggctactctactaaa
gtgggtgaacgcggagtgcagctgtctggtggtcagagacaaagggtagccattgcccga
gccattctcaagaacccagaaattttgttattagatgaagccactagtgctttagatgtg
gagtcagagcgtgtggtgcaacaagctctagacagattgatgaagaacaggacaacagtt
gtggtagcacataggctgtcaacaataaaaaatgcagaccaaatatcagttttaaatgat
gggaagatcatagaacaagggactcattcatcacttatagagaacaagaatggagcatac
tataagttgatcaacattcagcaacagcaacagcaatga
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