KEGG   Carya illinoinensis (pecan): 122289765
Entry
122289765         CDS       T08745                                 
Name
(RefSeq) decapping 5-like protein
  KO
K18749  protein LSM14
Organism
cill  Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:cill00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cill03019]
    122289765
Messenger RNA biogenesis [BR:cill03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     122289765
SSDB
Motif
Pfam: LSM14 FDF SM-ATX
Other DBs
NCBI-GeneID: 122289765
NCBI-ProteinID: XP_042952968
LinkDB
Position
12:22733865..22738882
AA seq 563 aa
MATESVGAKGPSSSSSSSSSSSSNGAASYIGSFISLISKSEIRYEGVLYYLNVHDSTIGL
NNVRSYGTEGRKKDGSQIPPSDKVFEYILFRGSDIKDLQVQSFPPAQTEEQIHGDPAIIQ
SRYSGIDSSSSSTSSTGVKTSTESNQWKDTPALTSRVYPGAPSSYQSVTQVGPLDHLPTA
EIAGSPSSMQMYWQGHSGTPVSISNPPHQPISFQPPSTGSFPSTMQSLSQAPQIQASTNP
SLLNTSEFGGPVSSSISSSSVHPHLSPPLCPTQCSASLDIPSSFFIKSSLPHSASMTANR
STPSSFASSCIDINTSKAQIGGKAISDPRSVLPISSMPCPPSSLVDSSRPLLTPPPSLLI
SDQLTQSRPYALSSMQKLYPDKSGFSAQTLTPSNSLPFISTSVSQAPLLPLPTSAQQSKH
SAAQFTEEFDFMAMNEKFNKDEVWGYLGKANDKTAVVQGYVADQSLAHRESLGLVPNLKP
AYNKDEFFDSISCNSLTRGARNAHNRFSERTKLNAETFGNFQQRPNVGYGGFAAGHGENY
PASYNWGRGYGYGGRGGGWNMPS
NT seq 1692 nt   +upstreamnt  +downstreamnt
atggcgactgagtctgtgggggcaaaaggtccctcttcttcttcttcttcttcttcatcg
tcgtcttccaatggcgcggcatcgtacatagggagcttcataagcctgatttcgaagtcc
gagattcgctacgagggcgtcctctactacctcaatgtccacgattccaccattggcctc
aacaacgttaggtcttacggaacagaggggcggaagaaagatggctcacaaattccacca
agtgataaggtgtttgagtacattcttttccgaggaagtgacataaaagacttgcaagtc
cagtccttcccacctgcccaaacagaagagcagattcatggtgatcctgctataatacag
tcacgctattctgggattgattcaagttcttcatcaacctcttcaactggggttaaaact
tcgacagagtcaaatcaatggaaagatacccctgctttgacgagtagagtctatcctggt
gcaccttcttcatatcaatctgtaacccaggtgggcccattggatcacttacctactgca
gaaattgctggttccccatcttcaatgcagatgtattggcaaggccacagtggaacacca
gtcagtatttccaatcctccccatcaacctatatcttttcagccaccatctactggatca
tttccctcgacaatgcagagtttatctcaggctcctcaaattcaggcatctacaaacccg
agcctgctgaatacatcagaatttggtggtcctgtatcttcatctatttcttcttcttct
gtacatccacacttgtcaccccctctttgtccaacacaatgttctgcttctcttgatatc
ccatcctcttttttcataaaatcatctttaccacattctgcatctatgactgctaataga
tcaactccatcttcttttgcttcatcttgcatagacataaacaccagtaaagctcaaatt
ggtggtaaagctatttctgacccaagatcagttctccctatctcatctatgccttgtcct
ccatcttcattggtggattcttcacggcccttgctaacaccacctccatcattgttaatt
tcagatcagttaacacagtctagaccatatgcgctttcttccatgcagaaactgtaccct
gataagagtggtttcagcgctcaaacactgacaccatctaattctctgccattcatttct
acttcagtatctcaagcacctcttttgccattgccgacatctgcacaacagtctaagcac
tcagctgcacaattcactgaagagtttgattttatggccatgaacgagaagtttaacaag
gatgaagtatggggttatcttggaaaggcaaatgataaaacagcggtagtacaaggttat
gtggccgatcaaagcttggcgcacagagagagtcttggcttggtacctaatcttaagcct
gcgtataataaggacgagttctttgactcaatttcatgtaattcactcacccggggagct
aggaatgcacataacaggttctctgaacgaaccaagctgaatgctgagacatttggcaat
ttccaacagaggcctaatgttggctatggtggctttgctgctggacatggtgagaattat
cccgcatcatataattggggaaggggatatggctatggtggaaggggtggcgggtggaac
atgccttcctaa

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