Carya illinoinensis (pecan): 122289773
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Entry
122289773 CDS
T08745
Name
(RefSeq) transcription factor MYC2-like
KO
K13422
transcription factor MYC2
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill04016
MAPK signaling pathway - plant
cill04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
122289773
04075 Plant hormone signal transduction
122289773
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cill03000
]
122289773
Transcription factors [BR:
cill03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
122289773
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GFIT
Motif
Pfam:
bHLH-MYC_N
HLH
bHLH-TF_ACT-like_plant
PUMA_CC
bHLH_INO4
SlyX
Motif
Other DBs
NCBI-GeneID:
122289773
NCBI-ProteinID:
XP_042952980
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Position
12:complement(23705606..23708360)
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AA seq
689 aa
AA seq
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MHGMTDYRITPSMNLWASDDNPSVIESFISSDLSFWATPPPPAQGQGQAQAQHQQLQPQS
SASDTGDPTKVLAQSQPSVTPFNQETLQQRLLALIDGAHESWTYAIFWQSSYDYSGASLL
GWGDGYYKGDDDKSKGKAKTTSSVADQEHRKKVLRELNSLISGSVVSSADDAIDEEVTDT
EWFFLVSMTQSFVNGSGLPGQAFFNSSPVWVSGSDRLSAWPCERTRQGQVFGLQTMVCIP
SANGVVELGSTELIFQSSDLMNKVRFLFNFESLEMGGSWPITDQGENDPSSLWISDPTQA
ASTEIKDSLDNSTVPSVPATTNGSLQISKAIQFENPSSSSLTENASAIHMQNTHQGHQQR
QQSQTQSFLTRELNFSEYGYDGSSVAKNGNSNSFKPESGEILNFEDNKRSSYVSSHPQFA
AAAVEENNKKKQSPTSRGSNEEGMLSFTSGVILSNTCMVKSSGGGGDSDHSDVEASVAKE
ADSSRVVEPEKRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDK
ASLLGDAIMYINELKAKLQSADSDKDDLQKQLEALKKDLTGKEQRHSGSEQPPPPQFDQD
SKTSRLIDLDIDVKIIGWDVMIRIQCNKKNHPAARLMAALKEMDLDVHHASVSVVNDLMI
QQATVKMGSRFYTQEQLRRELSAKVGDAR
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgcatggaatgacggattacaggattacgccgtcgatgaatctttgggcgtccgacgat
aacccatcggttattgaatctttcataagctccgatctctccttctgggccaccccgccg
cctcctgcgcaggggcaggggcaggcgcaggcgcaacatcagcaactgcagcctcaatcc
tctgcctccgatactggcgacccgaccaaggttcttgcccaatcccagccttccgtgacg
ccattcaaccaggagacactccagcagcgcctcctggcccttatcgacggggcccacgag
agctggacctacgccatcttctggcagtcctcctacgactactccggcgcctccctcttg
ggctggggtgacggctactacaagggtgacgacgacaagtctaaaggcaaggccaagacc
acgtcgtctgtggccgatcaggagcaccgcaagaaggtgctccgcgagcttaattcgctg
atatcgggctcggtcgtgtcctctgccgacgacgccatcgatgaagaggtcaccgatacc
gagtggttcttccttgtgtccatgacccaatccttcgtcaacggcagcggcctcccgggt
caggctttcttcaattcaagtccggtctgggtatccgggtcggaccgcctttccgcctgg
ccgtgcgaacgcacccgccagggtcaggtgtttgggctccagaccatggtgtgcatacca
tcggcgaacggcgtcgtcgagttgggctccaccgagttgattttccagagctcggatctg
atgaataaagtcagatttctcttcaatttcgagagcctggaaatgggtggttcctggcca
attaccgatcagggcgagaacgatccatcgtcactttggattagcgatcccacgcaggct
gcgtcgactgagatcaaagattcgctcgataacagtactgttccatcggttcctgccacc
accaacggcagccttcagatctcgaaggcgattcagtttgagaaccccagctccagtagt
ttgaccgagaacgcaagcgcgattcatatgcagaacactcaccagggccaccagcaacgt
cagcaatcgcagacccagagcttcctaaccagagaattgaacttttcggagtacggatac
gatggaagtagcgttgcgaagaatgggaattcgaattcgtttaaacccgagtcgggcgag
atcttgaatttcgaggataacaagaggagttcctatgtttcgagccatccccagttcgcg
gccgcggcggtggaggagaacaacaagaaaaagcagtcgccgacgtcgaggggtagtaac
gaggagggaatgctttcttttacgtcgggtgtcattttgtcgaacacctgtatggtgaag
tcgagcggcggcgggggcgattcggatcactccgacgtcgaagcgtcggtcgcgaaggaa
gccgatagtagcagagtcgtagaaccggagaaacggcctcgaaaacggggtcgaaagccg
gcgaacggacgtgaagaacctctgaatcacgtggaagcagagaggcagagaagagagaag
ctcaaccagaggttctacgcgctccgagctgtggttccgaacgtttcgaagatggacaaa
gcgtcccttctcggcgacgcgataatgtacataaacgagctgaaagcgaagctccaaagt
gcggactcggacaaggatgacctgcagaagcaattggaagcattgaagaaagacttgacc
ggcaaggaacagcgccattcgggctcggagcagccgcctcccccgcagttcgatcaagac
tcaaaaacgtcgagattgatagacttggatatcgacgtgaagataatcggatgggatgtc
atgattagaattcaatgtaacaagaagaaccacccggcggcgaggctgatggcggcgttg
aaggagatggacttggacgtgcaccacgccagcgtttcggtagtgaacgatttgatgatc
caacaagctacggtgaagatgggtagtcggttttacacgcaggagcagctcaggcgagag
ttgtcggccaaagttggagatgcccgataa
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