Carya illinoinensis (pecan): 122289888
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Entry
122289888 CDS
T08745
Name
(RefSeq) probable E3 ubiquitin-protein ligase ZFP1
KO
K19041
E3 ubiquitin-protein ligase RNF38/44 [EC:
2.3.2.27
]
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cill04121
]
122289888
Enzymes [BR:
cill01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122289888
Ubiquitin system [BR:
cill04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122289888
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4
zf-C3HC4_2
zf-RING_5
zf-RING_11
zf_RING_Vps8
zf-C3HC4_3
zf-RING_UBOX
zf-ANAPC11
zinc_ribbon_16
zf-RING_Vps41
zf_RING_Vps8_fungal
PHD_NSD
zf-RING_16
zf-C3H2C3
Motif
Other DBs
NCBI-GeneID:
122289888
NCBI-ProteinID:
XP_042953193
LinkDB
All DBs
Position
12:28827911..28833340
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AA seq
554 aa
AA seq
DB search
MGHRNMLCTNQMIGFGLDQNGQNYLRSEPCILFGANTNFAQPNIRSMVSASGNTANVDLQ
YVEHCESAMIYAMPQYNGMQHHHNPDLGIAPAANFYYSYMTPSSGGGEVPAPRSHGASGQ
LASSNNYGVMGVSADEHGSNNHFVDDIRGPCKRKYAEGTAGSFQHNDASSSSSSSVALLN
SRHPDGISIPSVMDSSSFGLSQYRGVGTPSLMEVGPQNSLGNRSGATGMDSLMVPDHSHL
VRGNYMGQPFQPAGALWLEQQLSSNSSDGGTSVWNQPPAMPHMHGSNANGGSVETRSMGA
PRYHETASNRTSSGFQPPSPINHRHHNHQHPSPSMLGVRGQTINFHPQVAAASYRVPTNS
LRSTPNPSQNSFEMGLRNLAAVPPTGLRIYHPHRGGFVPEATLRHRNLPHLRVLQADETA
ILDIPEFYQVGSLMDHHRDMRLDIEHMSYEDLLALGEQIGNVSTGLSEETVTSQLRTKTY
LSSATVINLEEAASVDHEADSCIICQDEYKNQEKIGILDCGHDYHADCLKKWLLVKNVCP
ICKSEALTTGRRVV
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atggggcatagaaatatgctatgcactaatcagatgattggttttggattggatcaaaat
ggccagaattatctccgttcggagccctgcatccttttcggggccaatacaaattttgca
caacctaatatccggagtatggtatcagcttcagggaacacggcaaatgttgacctccaa
tatgtagagcactgtgaaagtgctatgatctatgcgatgccacagtacaatgggatgcag
catcatcataatcctgatttaggtatcgcacctgctgccaacttttattattcatacatg
acaccttcatctggtggtggggaagtacctgctccccgaagtcatggggcctcaggtcaa
ttggcatcttccaacaattatggagtcatgggagtttctgcagatgagcatggaagcaac
aatcattttgtggatgacatcaggggtccatgcaagagaaaatatgctgaaggaactgct
gggagttttcagcataatgatgcctcatcaagctctagttcttcagttgccctcttgaat
tcaaggcatccggatggtatatccataccatctgtaatggattcatcatcttttggcctg
tctcagtacagaggggtcggtactccatcactcatggaagtaggaccccagaatagtttg
ggaaacagatcaggtgctactgggatggattctcttatggtgcctgaccatagtcatttg
gttcgtggaaattatatgggtcagccttttcagccagccggtgctctctggttggagcaa
cagttgagcagtaattccagtgatggaggtacttctgtctggaaccagcctcctgcaatg
cctcacatgcatgggagcaatgccaatggaggttctgtggagactcgcagcatgggtgca
ccgagatatcatgagacagctagcaacagaacttcatctggtttccagcctccttccccc
atcaatcaccggcaccacaatcatcaacatccaagcccgtcaatgctaggtgtgagaggc
cagactattaactttcaccctcaagtagctgcagcttcatatagagttcctacaaattct
ttacgcagcactccgaatccttctcaaaatagttttgagatgggtttaaggaatttggca
gctgttccaccaactgggcttcggatataccatcctcacagaggggggttcgtgcctgag
gcaactcttagacatcgcaacctgccacacttgagagttctgcaggctgatgaaactgcc
atactagatattccagaattttatcaagtggggagtttgatggaccatcatagagacatg
aggttggatatagagcacatgtcttatgaggaccttcttgcattgggggagcagattggg
aatgtaagcactgggttgtcggaggaaactgtcacaagtcaattgaggacaaaaacctat
ctatcatctgctactgttattaatctggaggaagcagcttctgtggatcatgaagctgat
tcttgcattatatgccaggatgaatataagaaccaagagaaaattggaattcttgattgt
gggcacgattatcatgcggattgcttaaagaagtggctgcttgtgaagaatgtctgcccc
atctgcaaatctgaggccttgaccacaggaaggagggttgtatag
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