Carya illinoinensis (pecan): 122289891
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Entry
122289891 CDS
T08745
Name
(RefSeq) two-component response regulator-like PRR37 isoform X1
KO
K12129
pseudo-response regulator 7
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
122289891
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Gene cluster
GFIT
Motif
Pfam:
Response_reg
CCT
AmiR_N
Jas_motif
Motif
Other DBs
NCBI-GeneID:
122289891
NCBI-ProteinID:
XP_042953202
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Position
1:55200986..55208840
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AA seq
775 aa
AA seq
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MQMNNNGPVTKELAELNHQMQDERKEMRVGVTGEGQGLSEEDEYQINKDAEDVDVAQSEA
VQGKAHSPDVSQSSQQQPQGPVVRWERFLPLRSLKVLLVENDDSTRQVVSALLRNCGYEV
TAVENGPQAWKILEDLTTRIDLVLTEVVLPCLSGIGLLCKIMSHNTCKNIPVIMMSSYDS
MNIVFKCLSKGAVDFLAKPIRKNELKNLWQHVWRKCHSSSDSGSESGIHTQKSTKLKSGE
ESDNNTGSNDEDDIGSIDLNVRGGSDTGSGTQTSWTKRAAEVDSPQPMSLWEEVDDPPDS
TCAQVIPSRTEAFGNNWVPVMATREHEGQDHELDLEMGISRIPNLQLENPSAKGLTNLAG
TIEEKISERNSKKNDEKLHKGRVELNSEKPNGEMRNQVADLVGLTSNDTDPQIETVVFDI
PNGISKVSNLKDKIIFDNKEIPSLELSLKRLRDAGDTGTSAHDRNVLRHSDLSAFSRYNF
ASNANQAPTGNVGSCSPRNSSEAEKTDSLQKFRSNSNRTHPNQCSNGSSNNNDMGSTTNN
VYTKQVAFSDKAAPNSAFKYLHPSSAFQPVQNGHNSPPQPIIQGKTDAATASKVSAQTAQ
TRDIKQPVHVQHHHHHYHHHHHHVHNMPQQKPANQDDLSSKNIAVEALQCGSSNMLSAPL
EGKAGNQSMNGNGSGSNSGSNGQNGSITDLNARGTNTESDNGVVTGFATRSGIDTNNSAQ
REAALIKFRQKRKERCFEKKVRYQSRKKLAEQRPRIRGQFVRQAVHKKESKDTHC
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atgcagatgaataataatggcccggtaaccaaagagttggcagaactaaatcaccaaatg
caagatgagcgcaaggaaatgagggttggggttaccggtgaaggccaagggctctcggag
gaagatgagtatcagattaataaggatgcagaagacgttgatgttgcgcagtcagaagca
gtccaaggcaaagcgcattccccagatgtctctcagagctcgcagcaacagcctcaaggg
cctgtggttcgctgggagaggtttctacctcttaggtctcttaaggttctactggtggaa
aatgatgattcaactcggcaggttgtcagtgcattacttcgaaattgtggctacgaagtt
acagcagtagaaaatggtccacaagcttggaaaatcttagaagatcttaccactcgtatt
gatcttgttttgactgaggtagttttgccttgtttatctggcattggccttctatgcaag
ataatgagccacaacacttgcaagaatattcctgtgattatgatgtcatcttatgattct
atgaacatagtctttaagtgtttgtcaaagggtgcagtcgactttttagcaaagcctatt
cgaaagaatgagcttaagaatctttggcagcatgtttggaggaaatgccacagctctagt
gatagtggaagtgaaagtggtatacacacacaaaaatcaacaaagttgaaaagtggtgaa
gagtcagacaacaacactggaagcaatgatgaagatgatattggaagcattgatttgaat
gttaggggtggaagtgatactggaagtggcactcagacatcttggacaaagagggcagca
gaggttgacagtccccaacctatgtcactgtgggaagaggtagatgatcctcctgatagc
acttgtgcccaggttattccttctaggactgaagcctttggcaacaactgggtgccggtg
atggcaacaagggagcatgaagggcaggatcatgagcttgacttggagatgggaatatct
agaattccaaatttgcagcttgaaaacccaagtgcaaagggattgaccaacttagctggc
actattgaagaaaagatctctgaaagaaactcaaagaaaaatgatgagaagctgcataaa
ggacgagtggagctcaacagtgagaaaccaaatggcgaaatgaggaaccaagttgctgat
ctagtgggtctgacatctaacgataccgatcctcagatagaaactgttgtctttgacatc
ccaaatggtatctccaaggtatccaacttgaaagataagattatctttgacaataaggaa
ataccttcccttgaactcagtttaaagaggctgagagatgctggagatactgggaccagt
gcccatgaccgaaatgtcttgagacattcagacctttcagccttctcaaggtataatttt
gcatcaaatgctaatcaggctccaacagggaatgttggtagctgttctcctcgtaacagc
tcagaggcagaaaaaaccgactcactgcaaaaatttcgatctaactctaatcgcacacat
cccaatcagtgttcgaatggtagtagtaataataatgacatgggctcaactactaataat
gtttatactaaacaagtggcattcagtgacaaggcagcacccaattctgcattcaaatat
cttcatccgtcctctgccttccaaccagtgcaaaatggccataattctccccctcagccc
ataatccaaggtaagacagatgcagcaacagctagcaaggtttcggcacaaacggctcaa
acaagggacatcaaacagccagtccacgtgcagcaccatcatcatcattatcaccaccac
caccaccacgtgcataacatgccccagcagaagccagccaaccaagatgatttatcttca
aaaaacattgcagtggaagctctgcagtgtgggtcatcaaatatgttgagtgcacctctt
gagggcaaggctggcaatcaaagtatgaatggaaatggctcgggaagtaacagcgggagc
aatgggcagaatggaagcatcacagatttaaatgctagaggaacaaacacggaaagtgat
aacggggtcgtaacaggatttgcaactagaagcggaattgatacaaacaattctgcacaa
agagaggctgctttaattaaattccgtcagaagagaaaagagagatgctttgagaagaag
gtccgataccagagcaggaagaaactggcagaacagagaccacgaattcgaggacaattt
gttcgacaggcggtgcacaagaaggaaagtaaggacacacattgttaa
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