Carya illinoinensis (pecan): 122289916
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Entry
122289916 CDS
T08745
Name
(RefSeq) LOW QUALITY PROTEIN: 26S rRNA (cytosine-C(5))-methyltransferase NOP2B-like
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cill03009
]
122289916
Enzymes [BR:
cill01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
122289916
Ribosome biogenesis [BR:
cill03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
122289916
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Methyltr_RsmF_N
RsmF-B_ferredox
Motif
Other DBs
NCBI-GeneID:
122289916
NCBI-ProteinID:
XP_042953245
LinkDB
All DBs
Position
12:complement(30610844..30618133)
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AA seq
403 aa
AA seq
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MFPVVELLEIIEAFEKPRPIRLRPNTLKTRRRDLADVLINRGVNLDPLSKWSKVGLAVYD
SQVPIGATPEYMAGFYMLQSASSFLPVMALAPQEKERIIDMAAAPGGKTTYIAALVKNSG
IIFANEMKAPRLKSLTANLHRMGVTNTVVCNYDGKELPKVLGVNXSRVLLDAPCSGTGVT
SKDESVKNSKSSEEIQKCAHLQKQLILAAIDMVDAHLKSRGYVVYSTCSIMLAENEAVVD
YALRKRNVKLVSCGLDFGRPGFIRFREQRFHQYLGNTRRFYPHVQNMDGFFVAKLKKISN
SKPVAEPSEPSKTVEQGSRTNESSNGKNTDELTVGTMKEIEVLENVVVENYKEESRATAN
QGKKRKFPSREEEKRKRKFPSREEISRAREEKRGALRKKRLHR
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgttccccgttgttgaacttctggaaattattgaagcctttgagaagcctcgacccata
cgtttgcgacctaacactttaaagacacggaggcgggatttggcagatgttctgataaac
agaggtgtaaacctagatcccttaagcaagtggtcaaaagttggactggctgtatatgat
tcacaagtgcccattggtgcaactcctgaatatatggctggtttctacatgctccagagt
gcaagctcttttttgcctgttatggcccttgctcctcaagaaaaggaacgaattattgat
atggcggctgcaccgggtggcaaaacaacctatattgctgcacttgtgaaaaatagtgga
attattttcgcaaatgagatgaaggcccctaggcttaagtcactcactgctaatctgcat
cgcatgggagtgacgaacaccgtagtttgtaactatgacgggaaggagctccccaaggtt
ttgggtgtcaacnacagcagagtattgctggatgccccttgcagtgggactggggttacc
tctaaagacgagtctgttaaaaactcaaaaagctctgaagaaatacagaaatgtgcccat
ttgcagaagcaactcattcttgccgcaattgacatggtggatgcccatttgaaatccagg
ggatacgttgtttattctacctgctccataatgcttgctgagaatgaagcagttgttgac
tatgcactcaggaagaggaatgttaaattggtgtcttgtgggcttgactttgggcgtcca
gggtttatccgctttagagaacaacgctttcaccagtacttgggaaacacaaggcgtttc
tatcctcatgttcaaaatatggacggattttttgtggcaaaattgaaaaaaataagcaac
tcaaagccagttgcagaaccttctgaaccatccaaaacggtggagcaaggttcaaggaca
aatgagagcagcaatggaaagaatacagatgaattgacggttggcactatgaaagaaata
gaggttttggaaaatgttgttgttgaaaattataaagaagaatcacgggcaactgccaac
caggggaagaaaaggaagttcccatcaagagaggaggagaagagaaaaaggaaattccca
tcaagagaggagatatcaagagcaagggaagagaagagaggggcgttgaggaaaaagagg
ctgcaccgctga
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