Carya illinoinensis (pecan): 122289956
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Entry
122289956 CDS
T08745
Name
(RefSeq) protein transport protein Sec61 subunit alpha-like
KO
K10956
protein transport protein SEC61 subunit alpha
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill03060
Protein export
cill04141
Protein processing in endoplasmic reticulum
cill04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
122289956
04141 Protein processing in endoplasmic reticulum
122289956
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
122289956
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cill04131
]
122289956
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
cill02044
]
122289956
Membrane trafficking [BR:
cill04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
SEC61 complex
122289956
Secretion system [BR:
cill02044
]
Sec (secretion) system
Eukaryotic Sec-SRP protein
122289956
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecY
Plug_translocon
Motif
Other DBs
NCBI-GeneID:
122289956
NCBI-ProteinID:
XP_042953346
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All DBs
Position
12:28497253..28504347
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AA seq
476 aa
AA seq
DB search
MGGGFRVLHLVRPFLSFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTG
ADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQK
LLGILIAVGEAVAYVLSGMYGSVGQLGVGNAILIIIQLCFAGIIVICLDELLQKGYGLGS
GISLFIATNICENIIWKAFSPTTINSGRGAEFEGAVIALFHLLITRTDKVRALREAFYRQ
NLPNVTNLLATVLVFLIVIYFQGFRVVLPVRSKNARGQQGSYPIKLFYTSNMPIILHSAL
VSNLYFISQLLYRRYSGNFLVNLLGKWKESEYSSGQSIPVGGLAYYITAPSSLADMAANP
FHALFYLVFMLSACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRESNLQKELNRYIP
TAAAFGGMCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERASELGFFGF
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atggggggaggatttagagttctccatttggtcagaccatttctttcattcctgcctgaa
gttcagagcgctgataggaaaatcccatttagagagaaggtcatctataccgtgatctct
ctattcattttcttggtttgcagtcagcttcctctctatggcatacactccacaacaggc
gcagatccattttattggatgcgagttattcttgcttcaaaccgtgggactgttatggaa
cttggaatcaccccgattgtgacttctggactggtgatgcaactccttgctgggtcaaag
atcattgaagtggacaacaatgtacgtgaagatcgtgccctcctaaatggtgcgcagaag
ttacttggcatcctgattgctgtgggtgaggcggttgcatacgttctctcaggaatgtat
ggcagtgttggccaacttggagttggaaatgcaattcttattatcattcagctctgcttt
gctggtatcattgtgatatgtttggatgaacttcttcagaaaggatatggtctaggctct
ggaatttcacttttcatagctaccaatatctgtgaaaacattatctggaaagcatttagc
cccaccactattaacagtgggcggggagctgaatttgagggtgctgttattgctctattc
catctgcttataactcgaacggacaaggttcgtgctctccgggaggccttttaccggcag
aatctaccaaatgtgacaaacttgcttgctacagtattggtcttcctaattgtaatctat
ttccaaggtttccgtgtggttttgcctgtgaggtcaaagaatgccagaggacaacaaggt
tcttatccaatcaagctgttctatacctccaacatgcccatcattctacactctgccctt
gtgtccaatctttacttcatctctcaactgctttaccggagatacagtggaaattttctg
gtgaatcttttgggtaaatggaaggaatccgaatactcaagtggccagtctatacctgtt
ggtggtcttgcatattatatcaccgcaccatcaagcttagctgatatggcagccaatcct
ttccatgcgttgttctatctggtctttatgttgtcagcatgtgcattattctcaaaaact
tggattgaagtttcaggatcatcagctagagatgttgccaagcagctcaaggaacaacaa
atggtgatgcccgggcatcgtgagtcaaacttacagaaggagctgaaccgttacataccc
acagctgcagcatttggaggcatgtgcattggtgcattgacagtgttggcagatttcatg
ggggcgattggttcggggacaggaattctgcttgcagtgacaatcatttaccagtacttc
gaaactttcgagaaggaaagagcaagcgagctcggcttctttggtttctag
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