Carya illinoinensis (pecan): 122289969
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Entry
122289969 CDS
T08745
Name
(RefSeq) RGG repeats nuclear RNA binding protein A
KO
K13199
plasminogen activator inhibitor 1 RNA-binding protein
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cill03041
]
122289969
Spliceosome [BR:
cill03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
122289969
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HABP4_PAI-RBP1
Stm1_N
CDV3
Spore_III_AF
Motif
Other DBs
NCBI-GeneID:
122289969
NCBI-ProteinID:
XP_042953373
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Position
12:complement(21580248..21585221)
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AA seq
359 aa
AA seq
DB search
MASTNPFHLLGDDDNEDLSQLLAAQQQKLVQPKKPQAQAPAQPAKPAKLPSKPLPPAEAV
REGKNEVGRGGGRGGGRGFGRGRGGGFNRDFNNENNSVEKNGLSGGYRSNEEGGAGRPIE
RHGSGGSRGFFRGGRHGGFNNGEDDEGERPRRIYERRSGTGRGSETKREGAGRANWGTPS
DEIAPDAEEPITENDKIVGAEKAMGGENAGDDNKENPDNGSEEKEPEDKEMTLEEYEKVL
EEKRKALLALKTQERKVDLDKDFESMQQLSSKKGNDDIFIKLGSEKDKHKEAEKEEKAKK
SVSINEFLKPAEGERYNTPGGRGRGRGRGPRGGFIGSNRSNAGAPSIEDQQQFPSLGAK
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atggcatccactaacccttttcatctcttgggtgatgacgacaacgaggacctgagtcag
cttctcgctgcccagcagcagaagctagtgcagccaaagaaaccccaagcccaagctcct
gctcagccggctaagccggccaaacttccatccaagccactacctcctgcggaagcggtg
agggagggaaagaatgaagtggggcgtggagggggccggggtggtggacgtggatttggg
cgtggacgtggtggtggctttaaccgagattttaacaatgagaataactctgtcgagaaa
aatggtttgtctggaggctataggtcaaatgaagaaggaggagcagggaggcccattgag
aggcatggctctggtggttcacgtggtttcttccgtggtggtcgtcatggtggttttaac
aatggagaggatgatgaaggtgagcggccacgtaggatatatgaacgtcgcagtgggact
ggacgtgggagtgagaccaaacgtgaaggagctggtcgggctaactgggggactccttct
gatgaaatagctccggatgctgaggagcctatcactgaaaatgataagattgttggtgct
gagaaggcaatgggaggggaaaatgctggtgatgataacaaagagaatcctgacaatgga
tctgaggagaaggaacctgaagataaggagatgactttagaagagtatgagaaggtactt
gaagagaagagaaaggctctgcttgcactaaagactcaggaaaggaaggttgacctggac
aaggacttcgagtccatgcagcagctctcaagtaagaagggcaatgatgacatctttatc
aaactgggttctgagaaggacaaacataaagaggctgaaaaagaagaaaaagcaaagaag
tctgtcagcataaatgagtttctaaagcctgctgaaggggagaggtacaatacacctggg
ggtcgtggtcgaggccgtggccgtggtccaagaggtggatttattggaagtaacaggagc
aatgcaggagcaccgtccattgaggatcagcagcagttcccctccttgggtgctaaatga
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