Carya illinoinensis (pecan): 122290021
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Entry
122290021 CDS
T08745
Name
(RefSeq) serine/arginine-rich splicing factor RS2Z32-like isoform X1
KO
K12896
serine/arginine-rich splicing factor 7
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122290021
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cill03041
]
122290021
Spliceosome [BR:
cill03041
]
Common components
Common spliceosomal components
SR proteins
122290021
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-CCHC
RRM_1
zf-CCHC_5
zf-CCHC_3
CLIP1_ZNF
zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
122290021
NCBI-ProteinID:
XP_042953467
LinkDB
All DBs
Position
1:complement(55315509..55318990)
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AA seq
351 aa
AA seq
DB search
MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDFAFVVCISVLCPILS
LIFFLMHVVHSHHSFCKNDLLYVLPFNCCLSQEFSDPRDAEDAVYGLNGRDIDGSRLIVE
FAKGGPRGPSGSREYLGRGPPPGSGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIER
NCKNSPKKLRRGRSYSRSPSPRHGKSRSYSRERSYSRSRSPLKRERSLERVERKSRSPRD
SRSPKWHRSSPPPSKGRKHSPTPDERSPEERGSPSQRDGRQANGSDYSGSPRGKSRSPIN
DADGEALRERSYRSPAEENGQSHSPSPIRRDDRSPVDDDDNHGSPRGSESN
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgcctcggtatgatgaccgctatggtggaactcgtctctacgtgggacgcttgtcctcg
aggacgaggtcgcgtgatcttgacgacctctttagcagatatggaagagtacgcgatgtg
gatatgaagcgcgacttcgcctttgttgtatgtatttcggttctttgtcctattctctca
ctcatcttttttctcatgcatgtggttcattcacatcactccttttgcaagaatgatctt
ctctatgttcttcctttcaattgctgcttatcccaggaatttagtgacccacgagatgct
gaagatgcagtatatggtctgaatggccgggacattgatggaagccgcctcattgtagaa
tttgcgaagggggggccacgtggtcctagtggatctcgtgagtatcttgggagaggtcct
cctcctggatcagggcgctgctttaattgtggaattgatggccattgggcgcgagattgc
aaggctggggactggaagaataagtgttatcgctgtggagaaagaggccacatagaaagg
aattgtaagaatagtcctaagaaacttagacgtgggcggagttactcaaggtcaccaagt
cctcgacatggcaaaagtcgtagttacagtagggagcgtagttacagtcgatctagatcg
cctctgaagagagagagaagccttgagcgagttgaaagaaaatcaaggagccctcgtgac
agccgaagccctaagtggcataggagttcaccaccaccatctaaagggaggaagcatagt
cctacacctgatgagaggagcccagaagaacgaggtagcccatcccaaagggatggcagg
caggccaatgggtctgattacagtggcagtcccaggggaaagagcagaagccctatcaat
gatgctgatggagaggccctccgggagcggagttataggagccctgctgaagaaaatggc
cagagtcacagccctagtcctatccgtagggacgacaggagccccgttgatgatgatgat
aatcatggttctccgaggggcagtgagtcaaactaa
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