Carya illinoinensis (pecan): 122290058
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Entry
122290058 CDS
T08745
Name
(RefSeq) probable ribosomal RNA small subunit methyltransferase B isoform X1
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cill03009
]
122290058
Enzymes [BR:
cill01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
122290058
Ribosome biogenesis [BR:
cill03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
122290058
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
NusB
RsmF-B_ferredox
FtsJ
TRM5-TYW2_MTfase
UTS2B
Motif
Other DBs
NCBI-GeneID:
122290058
NCBI-ProteinID:
XP_042953512
LinkDB
All DBs
Position
12
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AA seq
551 aa
AA seq
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MEVGSTMAHLLPLRASLPAAESHKSSSKPLKFSKRTRESKTPIYNPKKGSHGASNKTQKL
NLEVSPHRAVSAVRLMRIELGGAFADLLNEKGKGSGDNEMGYVARTLGFRTRELDYRDLR
LVTDIVGGTIRWRRFLDYLICSICHDENTFKRMEPLLLQILRIGFYEIIKLDMPRYAVVD
ENVRLAKVALRPGAGNMVNGILRKLILLQENNSLPLPKVEGDERTQARALATLYSHPVWM
VRRWTKCIGQEEAIRLMAWNNSDPSFSLRANRGKGVSRADLVMKLNLLQVPHELSLHLDD
FVRMKTGLQIVIQAGLLRDGLCSVQDESAGMVVSVVDPQPGESIIDCCAAPGGKTLYMAS
HLSGRDDTKMSHGVSGMVTAIDINKGRLRILKETGKLHQVDGVISTIHADLRIFAEKNPT
KGDKVLLDAPCSGLGVLSKRADLRWNRKLEDIEQLKNLQDELFDAASLLVKPGGVLIYST
CSIDPEENEERVAAFLLRHPEFSIDPVDRYVPSDFATEDGFYSSNPIKHSLDGAFAARLV
RDSESRCGGTP
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atggaagttggatcaacaatggcgcacctgctccctctccgtgcgagtctccctgcagct
gagagtcacaaatcttcttcgaagccactaaagttttccaagagaacacgggagtccaag
acacctatttacaatcctaaaaaaggttctcacggtgcctctaacaagacccagaagctg
aatttggaggtctcaccccatagggctgtgtctgcagtgaggctgatgagaatagagttg
ggtggtgcttttgctgatcttttgaatgagaaagggaaaggttccggtgataacgagatg
ggatatgtagcaagaactcttggatttcgcacccgggagttagattatcgggatcttaga
ttggttacagatattgttggtggcaccatccgttggaggaggtttcttgattacttgatc
tgttcaatatgccatgatgagaacacatttaaacgcatggaacctcttctcttacagatt
ctcagaataggtttctacgagattatcaagctagatatgccacgatatgcggttgtggat
gagaatgtgaggcttgcaaaggttgcccttagaccaggtgctggtaacatggtcaatggg
attctgagaaagcttattttgcttcaggaaaacaactctcttcctttacccaaagtggag
ggtgatgaacgcacacaagcacgtgctcttgccaccctgtactctcatcctgtttggatg
gtacggagatggacaaagtgtattgggcaagaagaagccattagattgatggcctggaac
aacagtgatcccagtttcagcttgagggcgaatcgtgggaaaggtgtttcaagagctgac
cttgttatgaagcttaatttgttgcaggtcccacatgagctttctttgcatttggatgac
tttgtccgaatgaaaaccgggttgcagattgtcatacaagccggcttactgagagatggt
ttatgttctgttcaggatgagagtgcaggtatggtcgtttctgttgtggatcctcaaccg
ggtgagagtataattgattgttgtgctgctccaggaggaaagactctttacatggcatcc
catttaagtggcagggatgatacgaagatgtctcatggtgtctcaggcatggtaacggcg
attgacataaacaaaggccgattaagaatccttaaagagacaggcaagttgcaccaagta
gatggcgtcatcagcaccattcatgctgatctccgtatctttgctgaaaaaaatcccacg
aagggtgataaggttttgttggatgctccatgttctggactgggtgttctctcaaagaga
gcggacctgcgctggaataggaaattagaggatattgaacaactgaagaatttacaggat
gagctatttgatgcagcatctctattggtaaagcctggcggagttttaatatacagtacc
tgttccatagatcctgaagagaatgaagagagagtggctgcatttcttctcaggcatcca
gaattttctatagatcctgtcgacagatatgtaccatctgattttgcaacggaggatggt
ttctattcctccaaccccataaaacattcgcttgatggggcctttgcagctcgtctagtt
cgagactcagaaagcagatgtggcggtacaccataa
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