Carya illinoinensis (pecan): 122290446
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Entry
122290446 CDS
T08745
Name
(RefSeq) syntaxin-61-like
KO
K08500
syntaxin of plants SYP6
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
122290446
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cill04131
]
122290446
Membrane trafficking [BR:
cill04131
]
SNARE
SNAP-25[C] (Qc)
STX6
122290446
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
STX6_10_61_N
SNARE
MCU
ATG17_like
Motif
Other DBs
NCBI-GeneID:
122290446
NCBI-ProteinID:
XP_042954061
LinkDB
All DBs
Position
12:complement(28519905..28524183)
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AA seq
247 aa
AA seq
DB search
MPSAQDPFYVVKEEIQESIDKLQSTFHQWERIHSDTGEQVHLTKELLAACDSIEWQVDEL
DKAISVAARDPSWYGIDEVELEKRRRWTSTVRTQVSTMKRALEAGKELNGTGTTSVSGMR
QELMRLPDSHQAGRSNLYSAQDNDDLIASESDRQMLLIKQQDEELDELSASVQRIGGVGL
TIHEELLAHDKIIDELGMEMDSTSNRLDFVQKKVAMIMKKAGAKSQILMILFLVVLFIVL
FVLVFFT
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgccttctgctcaagatccattttatgtagtgaaagaggagattcaagaatctatcgat
aagttgcagtctacttttcaccaatgggaacgcatccattctgatactggagagcaagta
catctcacgaaggaactgcttgctgcttgcgacagcattgagtggcaggtggatgaattg
gacaaagcaatctctgtagcagctagggatccatcttggtatggcattgatgaagtggaa
cttgaaaagcgaagaagatggaccagcactgttcgtactcaggtgagcaccatgaagaga
gcactagaagctggaaaggagttaaatgggactggcactactagtgtgagtggaatgcgc
caagaactaatgaggttgccagattcgcaccaggcaggtagatctaacctctacagtgcc
caagataatgatgacctcatagcatcggaatcagacagacagatgcttctgataaagcag
caggatgaggaattagatgaacttagtgctagtgtgcagagaatcggaggcgtagggctt
actatacatgaggagctccttgcacatgataaaattatagatgaactgggtatggaaatg
gacagtacatcaaatcgtcttgattttgttcagaaaaaggtggctatgattatgaaaaag
gctggtgcaaagagccagattctgatgatattgtttttggtggttttgtttatcgtcttg
ttcgttctggtcttcttcacttag
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