KEGG   Carya illinoinensis (pecan): 122290773
Entry
122290773         CDS       T08745                                 
Name
(RefSeq) proliferating cell nuclear antigen
  KO
K04802  proliferating cell nuclear antigen
Organism
cill  Carya illinoinensis (pecan)
Pathway
cill03030  DNA replication
cill03410  Base excision repair
cill03420  Nucleotide excision repair
cill03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cill00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    122290773
   03410 Base excision repair
    122290773
   03420 Nucleotide excision repair
    122290773
   03430 Mismatch repair
    122290773
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cill03032]
    122290773
   03400 DNA repair and recombination proteins [BR:cill03400]
    122290773
DNA replication proteins [BR:cill03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    122290773
DNA repair and recombination proteins [BR:cill03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     122290773
   MMR (mismatch excision repair)
    Other MMR factors
     122290773
  TLS (translesion DNA synthesis) factors
   Other TLS factors
    122290773
SSDB
Motif
Pfam: PCNA_C PCNA_N Rad9 Porin_OmpL1 HTH_ParB_Mtase Ribosomal_L14
Other DBs
NCBI-GeneID: 122290773
NCBI-ProteinID: XP_042954343
LinkDB
Position
13:8891922..8894163
AA seq 264 aa
MLELRLVQGSLLKKVMESIKDLVNDANFDCSATGFSLQAMDSSHVALVALLLRSEGFEHY
RCDRNISMGMNLNNMSKMLKCAGNDDIITIKADDGSDTVTFMFESPTQDKISDFEMKLMD
IDSEHLGIPEAEYHAIVRMPSAEFARICKDLSSIGDTVVISVTKEGVKFSTRGDIGTANI
VCRQNTTVDKPEEATIIEMNEPVSLTFALRYMNSFTKATPLSNMVTISLSSELPVVVEYK
IAEMGYIRFYLAPKIEEDEEETKS
NT seq 795 nt   +upstreamnt  +downstreamnt
atgctggaactccgtctagtacagggctcgctcctgaagaaggttatggagtccatcaaa
gacttggttaacgatgccaatttcgactgctcggccactgggttctcgcttcaggccatg
gactcgagtcacgttgctctggtagctctactcctccgatccgagggcttcgagcactac
cgctgtgaccgcaacatctccatgggcatgaacctcaacaacatgtcgaagatgctaaag
tgcgctggaaacgatgatatcatcaccatcaaggccgacgatggtagcgacaccgtcacc
ttcatgttcgagagccccacgcaagacaagatttctgattttgagatgaaactgatggac
atcgatagtgagcaccttggaattccagaggcagaataccatgctattgttcggatgcct
tcagctgagtttgctaggatttgcaaagatctcagtagtattggtgacactgttgtcatt
tctgtgactaaggaaggcgtgaagttctccacaagaggtgatattggaacagcaaatatt
gtttgcaggcagaataccacggtagataagccggaagaagcaacaatcatagagatgaat
gagccagtgtcattgacgtttgcgctgaggtatatgaattcctttacgaaggcaacccct
ttgtcaaacatggttacgattagcttgtcttcagagcttcctgtggtggttgaatacaag
attgcagagatgggttatattaggttctacttggccccaaagatagaagaggacgaagag
gagacaaaatcctaa

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