Carya illinoinensis (pecan): 122290865
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Entry
122290865 CDS
T08745
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 11-like
KO
K03008
DNA-directed RNA polymerase II subunit RPB11
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill03020
RNA polymerase
cill03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
122290865
09124 Replication and repair
03420 Nucleotide excision repair
122290865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cill03021
]
122290865
03400 DNA repair and recombination proteins [BR:
cill03400
]
122290865
Transcription machinery [BR:
cill03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
122290865
DNA repair and recombination proteins [BR:
cill03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
122290865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_L_2
RNA_pol_L
Glyco_transf_99
Motif
Other DBs
NCBI-GeneID:
122290865
NCBI-ProteinID:
XP_042954468
LinkDB
All DBs
Position
13:726698..728504
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AA seq
116 aa
AA seq
DB search
MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTVEREDHTIGNILRMQLHRDPNVLFAG
YKLPHPLQYKIIVRIHTASQSSPMQAYNQAINDLDKELDHLKNAFEIELAKHSREY
NT seq
351 nt
NT seq
+upstream
nt +downstream
nt
atgaacgctcctgaccgctatgaacgtttcgtcgtccccgaaggcaccaaaaaggtgtca
tacgagagggacacgaagataatcaacgccgcgtcgttcaccgttgagagagaagaccat
acgatcggaaacattcttcgcatgcaattgcacagggacccgaatgtgctattcgctggg
tacaagcttcctcacccactccagtacaaaatcattgttaggattcacaccgctagccag
tcgtcgccaatgcaggcatataaccaggctatcaatgatctcgacaaggaattggatcat
ttgaagaatgctttcgagattgagttggcaaagcattcgagggagtactga
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