Carya illinoinensis (pecan): 122291437
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Entry
122291437 CDS
T08745
Name
(RefSeq) E3 ubiquitin-protein ligase RHF2A isoform X1
KO
K19043
E3 ubiquitin-protein ligase RHF [EC:
2.3.2.27
]
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cill04121
]
122291437
Enzymes [BR:
cill01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122291437
Ubiquitin system [BR:
cill04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122291437
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-ANAPC11
zf-RING_5
RING_XB3-XBAT31
DUF4302
zf_RING_Vps8_fungal
zf-Nse
Trp_repressor
Motif
Other DBs
NCBI-GeneID:
122291437
NCBI-ProteinID:
XP_042955085
LinkDB
All DBs
Position
13:complement(22212078..22237834)
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AA seq
385 aa
AA seq
DB search
MEVQEETNTSEAHLTSAAAFVEGGIQEACDDACSICLESFCDSDPSTVTSCKHEFHLQCI
LEWCQRSSQCPMCWQPISLKDPTSQELLEAVERERSFRFNPSRNATIFHHPTLGDFELQH
QLPVGTSDAELEERIIQHLAAAAAMGRARHIARREGQRNRSSAQGRPQFLVFSTHPNAPP
AAPAPPQREEGENVPESTVAALSSPNMTVGEQPLQLTSPVPSPQADLISASASGSSSLAA
NQHGSDRTPIQPIPSSQDRAGPSDLQSFSESIKSRLNAVSIRYKESISKSTKGWREKLFS
RNTSMADLGSEVKREVNAGIATVSRMMERLETRDNSKTSVASVSNSSDNSSVAELDNEST
LETRGDNSLRDTNKQVSDAAGSSST
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atggaggttcaggaggagaccaacacgtctgaggcccatttgacatccgctgcagctttt
gtggagggtggaatccaggaagcctgtgatgatgcttgcagcatttgccttgaatccttc
tgtgatagtgatccttcaacggtgaccagttgcaagcacgagtttcatttgcaatgtatt
cttgaatggtgccagagaagctcacagtgtcccatgtgttggcaacctatcagcctgaag
gatcccaccagccaggaattgctcgaagcagtagaacgagagaggagttttaggttcaat
ccatctagaaatgcaactatatttcatcatccaactctgggggattttgagttacaacat
cagttaccggtgggcacaagtgatgctgaacttgaagagcgtataatccagcacttagct
gctgctgctgcaatgggacgagcacgccacattgcaagaagggaaggccaaaggaatagg
tcatcagctcagggtcgtcctcagttcttggtattctcaactcatcctaatgcaccccct
gctgctcctgctccacctcagagggaggaaggtgaaaatgttcctgaatccactgtggct
gctctttcttcacctaatatgactgtgggagaacaacctttgcaactgacttcacctgta
ccttctccccaagctgacctgatttctgcctcagcatcaggttcaagtagtcttgctgca
aaccaacatgggtcagataggacccccattcaaccaattccaagtagtcaagacagagct
ggaccttcagacctccaatcattttcagaatcaataaagtctcgactaaatgcagtgtca
atcagatacaaagaatccatttcgaagagcacgaaagggtggagggagaaattattctca
cgtaatacttctatggcagatcttggttctgaagttaaaagagaggtaaatgcagggatt
gcaaccgtatcacgcatgatggagcgtctggaaactagagacaatagtaaaacaagtgtt
gcttcggtgtcaaatagttcagataatagttcagttgcagaattagacaacgagtctaca
ttagagactcgtggtgacaattctttgagggatacaaataagcaagtttcagatgctgct
ggttccagttcaacataa
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