Carya illinoinensis (pecan): 122291466
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Entry
122291466 CDS
T08745
Name
(RefSeq) pre-mRNA-splicing factor CWC22 homolog isoform X1
KO
K13100
pre-mRNA-splicing factor CWC22
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cill03041
]
122291466
Spliceosome [BR:
cill03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
122291466
Complex C
U4/U6.U5 tri-SnRNP related factors
122291466
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Gene cluster
GFIT
Motif
Pfam:
MA3
MIF4G
Motif
Other DBs
NCBI-GeneID:
122291466
NCBI-ProteinID:
XP_042955124
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Position
13:31871144..31877257
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AA seq
866 aa
AA seq
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MVRKYSSESSDSEKRNRRKRNERRGERPHDDKHRERGSGKDLLDSDKRSRKRHGRLDERS
GDDKDRERVDEKDIRDKDGRLQSKHVEQKQSRQSSDEEGEWVDTERVRRERERNHRHEEG
HRHQETGELDKVKESRQSSDEEGEWVDRERGRRKRERNNRHEGHRHRETGELDKVKESYQ
SSDEYDNRIEREKRERERSRWHGDAHRQQETDDSGRKKDRHARQNSGDDDDRKTHRKSEQ
RKHRTEQQKQGLSSKGEDDRDSKALEDAKPHRQPRLQEGNLNGDASNLGKSGGIYIPPFK
LARMMKEVEDKSSVEYQRLTWDALRKSINGLVNKVNAANIKNIIPELFSENLIRGRGLFC
RSCMKSQMSSPGFTDVFAALVAVVNTKFPEVGDLLLRRIILQLKRAYKRNDKPQLLAAVK
FIAHLVNQQVAHEIIALELLTVLLENPTDDSVEVAVGFVTECGSILQDLSPKGLHGIFER
FRGILHEGEIDKRVQFLIEGLFAIRKAKFQGYPAVRPELDLVEQEDQLTHEASLQDEIDP
EITLDIFKADPNFIENERRYEEVRKTILGEESDDEDGSDAGSDDDEDDEDESEEEDEEQM
KIKDETETNLVNLRRTIYLTIMSSVDFEEAGHKLLKIKLEPGQEMELCIMLLECCSQERT
YLRYYGLLGQRFCMINKVHQENFEKCFVQQYSMIHRLETNKLRNVGKFFAHLLGTDALPW
HVLAYIRLTEEDTTSSSRIFIKILFQELSEHLGIRLLNERLTDPMMLDSFESIFPRDNPK
NTRFSINFFTSIGLGGITENLREYLKNMPRLIMQQEQAVSESESDDESGSSDSSDTKTAS
SERQSSDSSGSDESGRDDRRRKRRRE
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atggttagaaagtacagtagtgagtcctcggattctgagaaaagaaatagacgcaaacgc
aatgagaggcgaggtgagcgtccacacgatgataaacatagggaaagaggcagtgggaag
gatttgttggattctgataaaagaagtagaaaacggcacgggagactagatgagcgtagt
ggtgatgataaggatagggaaagagtggatgagaaggatattagggataaagatggaagg
ttacaaagcaaacatgtagagcagaagcaatctcggcaaagttctgatgaagagggtgag
tgggtagatacagaaagggtcaggcgagaaagagagagaaaccatcgacatgaggagggg
catagacatcaagaaactggggagcttgataaggtgaaagaatctcggcaaagttctgat
gaagagggtgagtgggtagatagagaaaggggcaggcgaaaaagagaaagaaacaatcga
catgaggggcatagacatcgagaaactggggagcttgataaggtgaaagaatcttatcaa
agttctgatgaatatgacaatcgaattgagagagagaagcgagaaagagagagatctcgc
tggcatggggatgctcatagacagcaggaaactgatgatagtggtagaaaaaaggaccgg
catgcgcgtcaaaattcaggagacgatgatgaccggaaaacgcacagaaaatcagagcaa
cgaaaacatcgtactgaacaacaaaagcagggtttgagttccaagggggaagatgataga
gacagtaaggccctggaagatgcgaaacctcatagacagccaagattacaagaaggaaat
ttaaatggggatgcatcaaatttgggtaagagtggtggaatttatattccaccatttaag
ttggctagaatgatgaaagaggtcgaggataaaagcagtgttgagtatcagcggttgaca
tgggatgcccttcggaagagtataaacgggcttgtgaacaaggttaatgccgctaatata
aagaatattattcctgagctcttctcggagaatctgatccggggtagaggtctattctgc
cggtcatgtatgaagtcacagatgtcatctccagggttcacagatgtgtttgctgcactg
gttgctgttgtcaacaccaagtttcctgaggtgggagatcttctattgagaaggattatt
ttgcagctcaagagagcatataagcgtaacgacaagccacaattactagctgctgttaaa
tttatcgcacatctagtgaatcagcaagtggctcatgagatcattgcgttagagttgctc
acggtgctgcttgagaatccaaccgatgacagcgttgaggtagccgttggctttgtcaca
gagtgtggatcgattttgcaagatctctctcccaaaggcctgcacggaatatttgagagg
tttcgtggaattcttcatgaaggggaaatagataaacgggtacaatttcttattgaaggg
ctatttgccataagaaaagcaaagtttcaggggtaccccgctgttcgtccagaactggac
cttgtagagcaggaagatcagttaacccatgaggcatctctccaagatgaaatagatcca
gagattacgcttgatatattcaaggcagatcctaattttatcgagaatgagagacgctat
gaagaggttaggaaaactattttgggtgaggagtctgatgatgaagacggttcagatgct
ggttcagatgatgacgaggatgatgaagatgaatctgaggaagaggacgaggagcagatg
aaaataaaggatgaaacagagacaaaccttgtaaatcttcggaggacaatctacttaacc
atcatgtctagtgtagattttgaggaggctggtcataagctcctgaaaatcaaactagaa
ccaggtcaagagatggagttgtgcattatgctcttggaatgctgcagtcaggagagaact
tacctccgctattatggtcttttgggccagcgattctgtatgatcaataaagtgcaccag
gaaaactttgagaagtgctttgtccagcaatattccatgattcatcggcttgaaacaaat
aagctgcgtaatgtggggaaattttttgcacatctactcggcacagatgctctgccttgg
catgttttagcctatatacgcttaacagaggaggatactacttcttcttctcgaatattc
attaagattctatttcaggaattgtcagagcatttgggcatccggttgctgaatgaacgg
cttacggatcctatgatgctggactcctttgaatctatattcccaagggataatcccaag
aacacacgtttttctattaacttcttcacatccattgggcttggtggcatcacagagaat
ttacgtgagtacttgaagaatatgccacgcctaatcatgcaacaagagcaagcagtgtca
gaatctgaatcagatgatgaatctggtagttctgatagttctgacacgaagacagctagt
tctgagagacagtcttctgattcctcaggctcggatgagagtggaagggatgatagacgg
aggaagaggaggagagaataa
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