Carya illinoinensis (pecan): 122291521
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Entry
122291521 CDS
T08745
Name
(RefSeq) phosphomethylpyrimidine synthase, chloroplastic isoform X1
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill00730
Thiamine metabolism
cill01100
Metabolic pathways
cill01240
Biosynthesis of cofactors
Module
cill_M00897
Thiamine biosynthesis, plants, AIR (+ NAD+) => TMP/thiamine/TPP
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
122291521
Enzymes [BR:
cill01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
122291521
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Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-GeneID:
122291521
NCBI-ProteinID:
XP_042955206
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All DBs
Position
13:complement(8578034..8583267)
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AA seq
690 aa
AA seq
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MNAKKDTLYSALESISFCYFPSPAKQCLRLQFLLQCSGRPIEMASLHASLTSAVCQNGSH
AASAKYPSTAFLPGFDVVGRVSSASKKETFALSVSSSPSATLTFDPPTTNSDKTKQRKHT
VDPASPDFLPLPSFEQCFPKSTKEYKEVIHEQSGHVLKVPFRCVHLAGDEPNFDTYDTTG
PQNYSPRTGLPKLRKDWVDKREKLGAPRYTQMYYAKQGIITEEMLFCATREKLDPEFVRS
EVARGRAIIPSNKKHLELEPMIVGRNFLVKVNANIGNSAVASSIEEEVYKVQWATMWGAD
TVMDLSTGRHIHETREWILRNSAVPVGTVPIYQALEKVNGIAENLTWEAFRDTLIEQAEQ
GVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFAYEHWDDILDICNQ
YDVALSIGDGLRPGSIYDANDTAQFAELLTQGELTRRAWEKDVQVMNEGPGHIPMHKIPE
NMQKQLEWCNEAPFYTLGPLTTDIAPGYDHITSAIGAANIGALGTALLCYVTPKEHLGLP
NRDDVKAGVIAYKIAAHAADLAKGHPHAQAWDDALSKARFEFRWMDQFALSLDPMTAMSF
HDETLPAEGAKVAHFCSMCGPKFCSMKITEDVRKYAEEHGYGSAEEAVQRGMDAMSAEFL
AAKKTVSGEQHGEIGGEIYLPASSLSSSEG
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcaaaaaaagataccttgtattcagctctagagagtatatctttttgttatttt
ccttctccagccaaacagtgcctgaggctccagtttttgctgcagtgttcaggtcgacca
atagagatggcatcactgcatgctagtttgacgtcagctgtgtgccagaatggaagccat
gctgcttcggcaaagtacccaagtactgccttcttgccagggtttgatgtggttgggcgg
gtctcgagcgcatctaagaaggaaacattcgctttgtctgttagctcgagccctagtgcc
acattaacctttgatcccccaacaaccaattcagataagaccaaacaaaggaagcataca
gttgatcctgcttctcctgattttctgcctcttccatcctttgaacaatgttttccaaag
agcaccaaagaatacaaggaagttattcatgaacaatctggtcatgtgctcaaggttccc
tttcgatgcgtccacctagctggggatgagccaaactttgacacttacgacaccaccggt
cctcaaaattacagcccccgcactggactaccaaaactgcgcaaagactgggttgacaag
cgggagaaattaggtgctcccagatacacgcaaatgtactatgctaagcagggaattata
actgaggaaatgttgttctgcgccactcgagagaagcttgacccagaatttgtgcggtca
gaggttgctcgtgggcgagcaatcataccttccaataagaagcacttggagctggagcca
atgatagttggaagaaactttttggtcaaagtgaatgccaacattggaaattctgctgtt
gctagctctatcgaagaagaggtttataaggtccagtgggcaactatgtggggtgcagac
actgtcatggatctctctacaggtcgccacatccatgagacacgcgagtggatccttcgt
aactctgctgtaccagtagggactgtacctatctatcaagcacttgaaaaagtcaacgga
attgccgaaaaccttacttgggaagctttcagagacaccctgattgaacaagctgagcag
ggtgtagattacttcactattcatgctggggttctgctacgatacatcccactaacagcg
aagcgaatgacaggtattgtttcccgcggaggatccattcatgcaaagtggtgcttagct
taccataaggagaattttgcatatgagcactgggatgacatacttgacatctgtaatcaa
tatgatgtggccctgtcaatcggagatgggctaagacctgggtccatttatgatgcaaat
gacactgctcagtttgcagagctcttgactcagggagaattgacccgaagagcatgggaa
aaggatgtacaggtcatgaatgaaggtcctggacatattccaatgcacaagattcctgaa
aacatgcaaaaacagctggaatggtgcaacgaagcacctttctacactcttggcccttta
actactgacatcgcccctggatatgatcacatcacctctgcaattggtgctgccaatatt
ggggctctgggcactgctcttctgtgttatgtaactccaaaagaacaccttgggttgcca
aaccgggatgatgtgaaggctggagttatagcatataagatagctgctcatgcagctgat
ttagccaaaggtcacccacatgctcaagcctgggatgatgcattaagcaaggcgagattt
gagttccggtggatggaccaatttgctttgtcattggaccccatgactgctatgtccttc
catgacgaaaccctgccagcagaaggtgctaaggtagcccatttttgttccatgtgcgga
cctaaattctgctctatgaaaataacagaggatgtgaggaagtatgctgaggagcatggc
tatggaagtgctgaggaagctgtgcagcgtgggatggatgctatgagtgctgagtttctg
gctgctaagaaaactgtcagtggagaacaacatggtgaaataggtggagaaatatacttg
ccagcaagttccttgagttcctcagagggttga
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