KEGG   Carya illinoinensis (pecan): 122291649
Entry
122291649         CDS       T08745                                 
Name
(RefSeq) TATA-box-binding protein
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
cill  Carya illinoinensis (pecan)
Pathway
cill03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:cill00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    122291649
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:cill03000]
    122291649
   03021 Transcription machinery [BR:cill03021]
    122291649
Transcription factors [BR:cill03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    122291649
Transcription machinery [BR:cill03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     122291649
  RNA polymerase III system
    TFIIIB
     122291649
  RNA polymerase I system
    SL1/TIF-1B
     122291649
SSDB
Motif
Pfam: TBP DUF3378 DUF4295
Other DBs
NCBI-GeneID: 122291649
NCBI-ProteinID: XP_042955413
LinkDB
Position
13:complement(34539494..34552818)
AA seq 201 aa
MADQGGLEGSQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAA
VIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIV
GSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRD
ETYTAFENIYPVLTEFRKNQQ
NT seq 606 nt   +upstreamnt  +downstreamnt
atggcggatcaaggaggcttggaaggaagccaacccgtagatcttaagaagcatccttct
gggatcgtccctaccctccagaatattgtgtcaacagtcaatttggattgcaagttggat
cttaaggccattgcacttcaagctcgtaatgcagaatacaatcccaagcggtttgctgcc
gtaattatgaggataagggaaccaaaaaccacagccttaatttttgcttctggaaagatg
gtttgtactggagctaagagtgaacaacagtcaaagttagctgcacggaagtatgctcgt
attattcagaagcttggttttccagctaagttcaaggatttcaagattcagaacattgtc
ggttcttgtgatgttaaattccccatcaggcttgaaggccttgcatattcccatggtgcc
ttttcaagttatgaaccagagctgttcccagggttgatctatcggatgaaacaaccgaaa
attgtgctgcttatttttgtgtcaggaaagattgttcttacaggagctaaggtgagggac
gagacctatacagcctttgagaacatatatcctgtccttacagagttcaggaaaaaccag
caatga

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