Carya illinoinensis (pecan): 122291685
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Entry
122291685 CDS
T08745
Name
(RefSeq) GTPase LSG1-2
KO
K14539
large subunit GTPase 1 [EC:3.6.1.-]
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
122291685
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cill03009
]
122291685
Ribosome biogenesis [BR:
cill03009
]
Eukaryotic type
Pre-60S particles
GTPases
122291685
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMR_HSR1
FeoB_N
RsgA_GTPase
Dynamin_N
Cue1_U7BR
DUF3094
AIG1
Motif
Other DBs
NCBI-GeneID:
122291685
NCBI-ProteinID:
XP_042955486
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All DBs
Position
13:complement(23505046..23520619)
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AA seq
600 aa
AA seq
DB search
MVKNEKIRLGRALVKQHNQMMQQSKEKGQIYRNQQKKILESVTEVTDIDAIIEQAEEADR
LFSLDHPIPNLLINLDSSTSTSNMTPEERRDQQKREEMLHASSLQVPRRPPWNAGMSGEE
LDVNERQAFLVWRRNLARLEENEKLVLTPFEKNLDIWRQLWRVVERSDLLVMVVDARDPL
FYRCLDLEAYAREIDEHKRTLLLVNKADLLPFSVRQKWAEYFRLNGILSVFWSAKAASAT
LEGKDFSDSRKMQDTQQMDNPDTKIYGRDELLARLQCEAEEIAKMRRKPHSNSTGSSNIQ
SQSPRRDVAGSSASKSVIVGFVGYPNVGKSSTINALVGQKRTGVTSTPGKTKHFQTLIIS
DELTLCDCPGLVFPSFSSSRYEMIASGVLPIDRMTEHRESIQIVANRVPRHVIEDVYKIK
LPKPKPYEPQSRHPLASELLRAYCASRGYVASSGLPDETRAARQILKDYIDGKLPHYEMP
PGISNEEGELEDTVEPHLSENDNSDSSDIENPQEVQGEDAPSFEHVLDDLNSFDIANGLS
SKKVTFKKPKASHKQHKKPQRKKDRSWRVENDDGDGMPVVRVFQKPVNAGPVKAGREDGD
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggtaaaaaatgagaaaatcaggttgggcagggctctagtgaagcagcacaaccagatg
atgcagcagtcgaaggagaagggccaaatctacaggaaccagcaaaagaagattcttgaa
tcggtcaccgaggtcacagacatcgacgccatcatagagcaggccgaggaggccgaccgt
ctcttctccctcgaccaccccatccccaacctccttatcaatttggattcaagcactagc
actagcaacatgacaccagaggaaaggagagatcaacagaagagagaggagatgctacat
gccagtagtctccaagtgccacgtaggccaccatggaatgctggaatgtctggagaagaa
cttgatgtaaatgaaagacaagctttcttagtatggcgccgaaaccttgcaagacttgag
gagaatgagaagcttgttcttaccccttttgagaagaacctggatatctggagacagctc
tggcgagtcgtggaacgtagtgatctgcttgtaatggttgttgatgcccgagacccactg
ttctaccgctgccttgatcttgaggcatatgcacgagagattgatgagcacaaacggaca
ttgcttcttgttaacaaggctgatcttttaccattttctgtcaggcagaaatgggcagaa
tattttcgcctcaatgggattctctctgtgttctggtcagctaaagctgcttctgctact
cttgaagggaaagattttagtgattctcggaagatgcaagacacccagcagatggataac
cctgatacaaaaatatatggaagagatgagcttttggcccgcttacagtgtgaggcagaa
gagatcgccaagatgaggaggaaaccacactccaatagtacagggtcatctaacattcag
tctcagtctcctcgtagagatgttgctggaagttctgcatcgaagagtgtaattgtggga
tttgttggctatcctaatgtggggaagagctcaacaattaatgctctggttggccagaag
cgcacaggtgtcacttctactccagggaagactaaacattttcaaactctcattatttct
gatgagctaaccctatgtgactgccccggattagtatttccatccttctcaagctcaaga
tatgagatgattgcatctggagtattgcctattgatcggatgactgagcacagggagtct
atacagatagtggccaatcgagttcctagacatgtcattgaggatgtctacaagattaag
ctgccaaaaccaaagccatatgagccacagtcccggcaccctctggcatctgaactgttg
agagcttattgtgcctctcgtgggtatgttgcttctagtggactgcctgatgaaactaga
gctgcccgccagattttgaaggattacattgacgggaagttgccccactatgaaatgccc
cctggaatatccaatgaggaaggtgaattggaagatacagtagaaccacacttgtctgaa
aatgataattcagattcatctgatattgaaaaccctcaagaagttcaaggtgaagatgca
cctagtttcgagcatgtgcttgatgatctcaattcgttcgatatagctaatggtctttct
tctaaaaaggtcacgtttaagaagcccaaggcatctcataaacaacacaagaaaccccag
aggaaaaaggatcgatcgtggagggttgaaaatgatgatggtgatggaatgccagtagta
agagtctttcagaagccagtgaatgcaggtcctgtaaaggcggggcgtgaggatggtgat
tga
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