Carya illinoinensis (pecan): 122291706
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Entry
122291706 CDS
T08745
Name
(RefSeq) protein argonaute 5-like isoform X1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cill03019
]
122291706
03036 Chromosome and associated proteins [BR:
cill03036
]
122291706
Messenger RNA biogenesis [BR:
cill03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
122291706
Chromosome and associated proteins [BR:
cill03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
122291706
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
122291706
microRNA pathway
RISC loading complex
122291706
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Piwi_N
CFAP107
FliD_C
Motif
Other DBs
NCBI-GeneID:
122291706
NCBI-ProteinID:
XP_042955528
LinkDB
All DBs
Position
13
Genome browser
AA seq
995 aa
AA seq
DB search
MSRRGGGRKPDARRNEPSPASSSSHQGGGRGRGDGGGRASGRGGVAGGRVGGRGGRGRGA
PSGFSTVPSLAAAFPASPPTEANFPAAPARAALTPSSSSASSSLAPPSTSMSATALSSEI
EGRLKLQTPAHMDREAPPTSSKALCPPKRPGYGTIGKKVFVRANHFLVELADKDLHQYDV
SITPEVTSKKVNRDIMIQLTELYGDSHLGRRKPAYDGWKILYTAGPLPFKSQEFVVKLID
NDGRGASSKSARKERQFKVEIKLASKPDLHNLREFLCGKQLDSPQETIQVLDVVLRAAPS
QNYTSVGRSFFDPKLGPAGELGDGIEYWRGYYQSLRPTQMGLSLNIDVSARAFYEPILVT
QFIAKHFNFSFSRQLSDQDRNKIKKALRGVNIELTHREHSRRYKVVGVSTQPTSQITFTH
DDKKTKMSVVQYYHDKYNILLQHSSLPALQAGNDAKPVYLPMELCKIVAGQRYSKRLNER
QVTNLLRATCQRPKARESSIEEMVRLNNFNRIALVKEEFGIEVRDKLAVVDARILPSPML
KYHDTGKESREVPKMGQWNMINKKMINGGTVDFWTCVNFSTRVNRDLPSEFCDQLINMCN
SKGMVFNPHPLIHIRSAHSGQIEKALNGIHKELAGKQLQLLIIILPDISGSYGKIKRICE
TELGIVSQCCQPRQASKLNKQYLENVALKINVKVGGRNTVLQDAIQRKIHLLTDRPTIVF
GADVTHPQPGEDSSPSIAAVVASTDWPEVTKYRGLFAAQAHREEIIQDLYKLDQDPQRGP
VHGGMIRELLKAFRISTGVRPERIIFYRDGVSEGQFSQVLLYEMDAIRKACLSLESGYLP
PVTFVVVQKRHHTRLFPADHSRRDQMDRSGNIIPGTVVDTKICHPTEFDFYLNSHAGIQG
TSRPTHYHVLYDENGFSADALQMLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARYYIE
GDSSESGSTGGNESRREFRALPLVKDNVKNVMFYC
NT seq
2988 nt
NT seq
+upstream
nt +downstream
nt
atgtcacggcgaggcggtggcaggaaacctgacgctcgccgcaacgagccctctcctgcg
tcttcatcgtctcatcaaggaggtggaagaggcagaggagacggcggcggccgtgctagt
ggaagaggtggtgttgctggtggtcgggtgggtggcagaggaggaagaggccgtggtgct
ccttcgggattctctaccgttccttcgctggctgctgcttttcctgcttcgcctccaact
gaggctaactttcccgccgctcctgcacgggcggctctaactccgtcttcttcttctgcg
tcgtcaagcttggcaccgccttcgacttcgatgtcggcgactgctctgagcagtgaaatc
gaggggcggctcaaactgcagactcctgcacacatggatagggaggcgccgccgacgtcg
tcgaaggctttgtgccctccgaagaggccgggctacggtaccatcggcaaaaaagtattt
gtcagagcaaatcattttctcgtcgaacttgcagacaaagatctccatcaatacgatgtt
tcgataacgccagaggttacgtcgaagaaagtcaacagggatattatgattcaactaact
gagttgtatggtgattctcatttgggaaggcgaaagcctgcttatgatggctggaagatc
ctctatacggcagggccattgccgtttaaatctcaggaatttgttgtcaagttaatagat
aatgatggtcgtggtgcctcatctaaatcagcgaggaaagaacgtcagtttaaagtggaa
attaagttggcttctaaaccggacctgcataatcttcgagagtttttatgcggtaaacag
ctggattcaccgcaagaaacaatacaagttcttgatgttgtccttagggcggcaccatct
cagaactatacttctgtggggaggtcattttttgatccaaaattgggtccagcaggtgag
ctgggagacggcattgaatattggagaggttactatcagagtcttaggccaactcagatg
ggactttctctcaacattgatgtgtcagccagggctttctatgaaccaattcttgtgaca
cagttcattgcaaaacatttcaatttcagtttttcaaggcaactatctgatcaggatcgc
aataagattaaaaaggcactgagaggagtcaacatagagcttactcatagggagcattcc
agacgttacaaagttgtcggggtatccactcaaccaactagccagataacgtttactcat
gatgacaagaaaacaaagatgtctgttgttcaatattatcatgacaaatataatattttg
cttcagcactcgtctttgcctgcccttcaggctgggaatgatgccaaacctgtttattta
ccaatggagctttgtaagattgttgctggacagagatactcgaagagattaaatgaaaga
caagtaactaaccttttaagggcaacttgtcagcggcctaaagcaagggaaagtagtatt
gaggagatggttagactaaataatttcaatcggattgcacttgtaaaggaggaatttggg
attgaagtaagggacaaacttgcagtggttgatgctcggattttaccatctccaatgctt
aaatatcatgataccggaaaagaatcaagggaagttcccaagatggggcagtggaatatg
ataaacaagaaaatgatcaacggcggtacagtagatttttggacatgtgtgaatttctct
acacgggtgaacagggatttgccttctgaattctgtgaccaattgattaacatgtgcaac
agcaaaggaatggttttcaacccacatcctttgattcacatacgttcagctcattctggt
caaattgagaaggctctaaatggaattcataaagaattggcaggaaaacaacttcagctg
ttgataattattttgcctgatatcagtgggtcatacgggaaaattaaacgaatctgtgaa
actgaactgggaattgtttctcagtgctgtcagcctaggcaagcatcaaagctaaataag
cagtatcttgaaaatgtggccctcaagattaatgtgaaggttggaggacggaacactgtg
ctacaagatgctattcaaagaaaaattcatcttttgactgatcgccctacaattgtattt
ggtgcggatgtgacgcatccacaacctggcgaggactctagtccttcaattgcagcggtt
gtggcttcaacggattggccggaggtaaccaagtacagaggattatttgctgcacaagct
cacagggaggaaattattcaagatctttataaattagatcaggatcctcaaaggggtcca
gttcatggaggaatgatccgggaactacttaaagccttcaggatttccactggggttaga
cccgaaaggattatattctacagggatggtgttagtgaaggccaattcagtcaagttctg
ctctatgagatggacgcgataagaaaggcctgtctctcactagagagtggatacctacca
ccagttacctttgttgtggtgcagaaaagacatcatacgcgccttttccctgcagatcat
agtagacgagatcagatggacaggagtggcaatattattccaggaactgttgttgatacc
aagatttgccatccaactgaatttgacttttacctcaacagccatgctggaattcaggga
actagtcgcccaacacactaccatgtgttgtacgatgagaatggattcagcgcagatgca
ttgcaaatgcttacaaacaatttatgttacacgtatgctaggtgcactcgatcagtttct
atagtccctcccgcatattatgcccacttggctgcatttcgtgcacgatattacattgaa
ggtgattcgtcagaaagtggttcaaccggcgggaatgagagcagaagggagttcagggcc
cttccactcgtcaaggacaatgttaagaatgttatgttttattgctga
DBGET
integrated database retrieval system
