Carya illinoinensis (pecan): 122291707
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Entry
122291707 CDS
T08745
Name
(RefSeq) protein argonaute 5-like isoform X1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cill03019
]
122291707
03036 Chromosome and associated proteins [BR:
cill03036
]
122291707
Messenger RNA biogenesis [BR:
cill03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
122291707
Chromosome and associated proteins [BR:
cill03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
122291707
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
122291707
microRNA pathway
RISC loading complex
122291707
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Piwi_N
Motif
Other DBs
NCBI-GeneID:
122291707
NCBI-ProteinID:
XP_042955532
LinkDB
All DBs
Position
13:complement(27993297..28004689)
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AA seq
993 aa
AA seq
DB search
MSRRGGGKQPDARRNEPSSASSSSHQGGGRGRGGGGGGASRRGGVAGGRVGGRGGRDRGA
PSGFSTVTSPAAAFPASSPTEADFPAAPARAALTPSSSYASSSSAPPSNSMSASALSSEI
EGLLKLQTSEHTDRAAPPTSSEALCLPKRPGYGTIGKKVFVRANHFLVEVADKDLHHYDV
SITPEVVSKKVNRDVMIQLIELYGDSHLGRRKPAFDGRKSLYTAGPLPFKSEEFVVKLID
YDGRGASSKSARKERQFKVEIKLASKADLHYLREFLCGKQLDAPQETIQVLDVVLRVAPA
QNYTSVGRSFFDPKLGPAGELGDGIDYWRGYYQSLRPTQMGLSLNIDVSAGAFYEPILVT
EFVAKHFNFSFSRQLSDQDRNKIKKALRGVKIELTHMEQRHKVVGVSTQPTSQITFTLDD
TKTKMSVVQYFRDKYDIVLQHSSLPALQAGSDANPVYLPMELCKIVAGQRYTKRLNERQV
TNLLRATCQRPKERESSIREMVTLNKFKWIALVKEEFGIEVRDRLAVVDARILPSPMLKY
HDTGIESREVPKMGQWNMINKKMINGGRVDFWTCVNLSTQVNRDLPFEFCDQLINMCNSK
GMVFNPDPLIPIRSAHSGQIEKALYGIHKELAGKQLQLLIIILPDISGSYGKIKRICETE
LGIVSQCCQPRQASKLNKQYLENVALKINVKVGGRNTVLQDAIQRKIHLLTDRPTIVFGA
DVMHPQPGEDSSPSIAAVVASMDWPEVTRYRGLFAAQAHREEIIQDLFKLDQDPQRGPVH
GGMIRELLIAFRISTGVRPERIIFYRYGVSEGQFSQVLLYEMDAIRKACLSLENGYLPPV
TFVVVRKRHHTRLFPADHSRHDQMDRSGNVLPGTVVDTKICHPTQFDFYLNSHAGIQGTS
RPTHYHVLYDENGFSADALQMLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARYYIEGD
SSESGSTGGNESRREFRALPLVKDTVKNVMFYC
NT seq
2982 nt
NT seq
+upstream
nt +downstream
nt
atgtcacggcgaggcggtggcaagcaacctgacgctcgccgcaacgagccctcgtcagcg
tcttcatcgtctcatcaaggcggtgggagaggcagaggaggcggcggcggcggtgctagt
agaagaggtggtgttgctggtggtcgggttggtggtagaggaggaagagaccgtggtgct
ccttcgggattctctaccgttacttcaccggctgctgcttttcctgcttcgtctccaact
gaggctgactttcccgctgcgccggcacgggcggctctaactccgtcttcttcttatgcg
tcgtcaagctcggcaccgccgtcgaattcgatgtcagcgtctgctttgagcagtgaaatc
gaggggctgctcaaactgcagacttctgagcacacggatagggcggcgccgccgacgtcg
tcggaggctttgtgccttccgaagaggccgggctacggtaccattggaaagaaagtattt
gtcagagcaaatcattttctggttgaagttgcagataaagatctccatcactacgatgtt
tcaataacgccagaggttgtctcgaagaaagtcaacagggatgttatgattcaactaatt
gagttgtacggtgattctcatttgggaaggcgaaagcctgcttttgatggcaggaagagc
ctctatacggcagggccattgccgtttaaatctgaggaatttgttgtcaagttaatagac
tatgatggtcgtggtgcctcatctaaatcagcgaggaaagaacgtcagtttaaagtggaa
attaagttggcttctaaagcggacctgcattatcttcgagagttcttatgcggtaaacag
ctggatgctccgcaagaaacaatacaagttcttgatgttgtccttagagtggcaccagct
cagaactatacttctgtggggaggtcattttttgatccaaagttgggtccagcaggtgag
ctgggagacggcattgactattggagaggttactatcagagtcttaggccaactcagatg
ggactttccctcaacattgatgtgtcagccggggctttctatgaaccaattcttgtgacc
gagttcgttgcaaaacatttcaatttcagtttttcaaggcaactatctgatcaggatcgc
aataagattaaaaaggcactgagaggagtcaagatagagcttactcatatggagcaacgt
cacaaagttgtcggggtatccactcaaccaactagccagataacgtttactcttgatgac
acaaaaacaaagatgtcggttgttcaatattttcgtgacaaatatgatattgtgcttcag
cactcgtctttgcctgcccttcaggctgggagtgatgccaatcctgtttatttacctatg
gagctttgtaagattgttgctggacaaagatacacgaagagattaaatgaaagacaagta
actaaccttttaagggcaacttgtcagcggcctaaagaaagggaaagtagtatcagggag
atggttacactaaataagttcaaatggattgcactcgtaaaggaggaatttggaattgaa
gtaagggacagacttgcagtggttgatgctcggattttaccatctccaatgcttaaatat
catgatactggaatagaatcaagggaagttcccaagatggggcagtggaatatgataaac
aagaaaatgatcaacggcggtagagtagacttttggacatgtgtgaatttgtctacacaa
gtgaacagggatttgccgtttgaattctgtgaccaattgattaacatgtgcaacagcaaa
ggaatggttttcaacccagatcccttgattcccatacgttcagcacattctggtcaaatc
gagaaggctctatatggaattcataaagaattggcaggaaaacaacttcagctgttgata
attattttgcctgatatcagtgggtcatatgggaaaattaaacgaatctgtgaaactgaa
ctgggaattgtttctcagtgctgtcagcctaggcaagcatcaaagcttaataagcagtat
cttgaaaatgtggccctcaagattaatgtgaaggttgggggacggaacactgtgctacaa
gatgctattcaaagaaaaattcatcttttgactgatcgccctacaattgtatttggtgcg
gatgtgatgcatccacaacctggcgaggactctagtccttcaattgcagcggttgtggct
tcaatggattggccggaggtaaccaggtacagaggattatttgctgcacaagctcatagg
gaggaaattattcaagatctttttaaattagatcaggatcctcaaaggggtccagttcat
ggaggaatgatccgggaactacttatagccttcaggatttccactggggttagacccgaa
aggattatattctacaggtatggtgttagtgaaggccaattcagtcaagttctgctttat
gaaatggacgcaataagaaaggcctgtctctccctagagaatggatacctaccaccagtt
acctttgttgtggtgcggaaaagacatcatacgcgccttttccctgcagatcatagtaga
catgatcagatggacaggagtggcaatgttcttccaggaactgttgttgataccaagatt
tgccatccaactcaatttgacttttacctcaacagccatgctggaattcagggaactagt
cgtccaacacactaccatgtgttgtacgatgagaatggattcagtgcagatgcattgcaa
atgcttacaaacaatttatgttacacgtatgctaggtgcactcgatcagtttctatagtc
cctcctgcatattatgcccacttggctgcatttcgtgcacgatattacattgaaggtgat
tcatcagaaagtggttcaaccggcgggaatgagagcagaagggagttcagggcccttccc
ctcgtcaaggatactgtgaagaatgttatgttttattgctga
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