Carya illinoinensis (pecan): 122291712
Help
Entry
122291712 CDS
T08745
Name
(RefSeq) ABC transporter F family member 1
KO
K06185
ATP-binding cassette, subfamily F, member 2
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cill03009
]
122291712
Ribosome biogenesis [BR:
cill03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
122291712
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
AAA_21
SMC_N
AAA_29
AAA_23
MMR_HSR1
AAA_14
AAA_22
AAA_27
RsgA_GTPase
AAA_28
AAA_24
AAA_15
VapE-like_dom
Motif
Other DBs
NCBI-GeneID:
122291712
NCBI-ProteinID:
XP_042955539
LinkDB
All DBs
Position
13:complement(17120147..17126738)
Genome browser
AA seq
600 aa
AA seq
DB search
MVSDASKKKAAQKKAAAAAKRGGKAAAASSKSAAGVSSDSQNGAEKLANGFDAFAISDRT
CTGVLCSHPLSRDIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIG
CRELPIPDHMDIFHLTREIEASDMSALEVVISCDEERLRLEKEAEVLAAQDDGGGEPLER
IYERLDALDASTAEKRAAEILHGLGFDKQMQAKKSCDFSGGWRMRIALARALFMNPTILL
LDEPTNHLDLEACVWLEETLKKFDRILVVISHSQDFLNGVCTNIIHMQNKKLKIYTGNYD
QYVQTRSELEENQMKQYKWEQEQIASMKEYIARFGHGSAKLARQAQSKEKTLAKMERGGL
TEKVSRDKILVFRFVDVGKLPPPVLQFVEVTFGYTPENLIYKNIDFGVDLDSRIALVGPN
GAGKSTLLKLMTGDLFPIDGMVRRHNHLRIAQFHQHLAEKLDMELSALQYMIKEYPGNEE
ERMRAAIGKFGLSGKAQVMPMKNLSDGQRSRVIFAWLAYRQPHLLLLDEPTNHLDIETID
SLAEALNEWDGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKRHLKIKAGLSD
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggtatcggacgccagcaagaagaaggcggcgcagaagaaggcggccgcggcggccaag
agaggaggcaaggccgcggctgcatcttcaaaatcggcggcgggggtttcttccgattct
cagaacggagctgagaaattggcgaatggatttgatgcttttgccatatccgatcggacg
tgtaccggcgtgctctgctcgcatccgctctcccgagatatccgcatagaatctttatct
gttacgtttcatgggcacgatctcatagttgattctgaacttgagcttaactatggcagg
cgttatggattgcttggactaaatgggtgtgggaaatctacacttctcactgcaataggg
tgccgagagcttccaatacctgaccacatggacatttttcatctcacgagggagattgaa
gcttctgatatgtccgcactagaggttgtcataagctgtgatgaggagaggttgagatta
gagaaagaagctgaagttctggctgcacaggatgatggaggtggagaacctcttgaaaga
atctatgagcgtctggacgccttagatgcatcaactgcagagaagcgagccgctgaaatc
ttgcatggtcttggatttgataagcagatgcaggcaaagaaaagttgtgatttttctggt
ggctggagaatgagaattgctttagcacgggctctctttatgaacccaactatcctgttg
cttgatgaacctactaatcatcttgatctagaagcttgtgtctggttagaggagacttta
aagaagtttgaccgaatcctagttgtgatttcacactcacaggacttcttgaatggtgtc
tgcacaaacattatccacatgcaaaacaagaaattgaagatttacacaggtaattatgat
caatacgttcagacccgttctgaactagaagagaaccagatgaaacaatacaagtgggag
caggagcagattgcttcaatgaaggaatatattgctagatttgggcatggttcagcaaaa
ctagctcgccaggcacaaagcaaagagaaaacattggcaaaaatggagcgaggtggactt
accgagaaggtgtcgagagacaagatattggtcttccgctttgttgacgtgggaaagctt
ccgccaccagtacttcaatttgtggaagtgacattcggttatacgccagaaaatcttatt
tacaagaacattgacttcggggtagacttggactcaaggatagctttggtgggacccaat
ggagctggcaagagtacgctgctgaagttaatgacaggtgatctgtttcctattgatggc
atggtccggcggcataatcacctgagaattgcacagttccatcagcatttggctgagaaa
cttgacatggaactgtctgcacttcagtatatgatcaaagagtacccaggcaatgaggag
gagaggatgagggccgcaattggaaaatttggactgtctggtaaagcccaggtgatgcca
atgaagaatttatcagatgggcaaaggagccgagtaatctttgcatggttggcttacagg
cagccccacttgctgctgctagatgagccaactaatcacttggacattgaaacaattgat
tctcttgctgaagcactgaacgagtgggatgggggtctggttcttgttagccatgatttc
aggctcataaaccaggttgcccatgagatatgggtgtgtgagaatcaagctgtcacccgg
tgggagggtgatattatggacttcaagcggcatctgaagataaaggctggtttatctgat
tga
DBGET
integrated database retrieval system
