KEGG   Carya illinoinensis (pecan): 122291798
Entry
122291798         CDS       T08745                                 
Name
(RefSeq) protein transport protein SEC31 homolog B-like isoform X1
  KO
K14005  protein transport protein SEC31
Organism
cill  Carya illinoinensis (pecan)
Pathway
cill04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:cill00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    122291798
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cill04131]
    122291798
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:cill02044]
    122291798
Membrane trafficking [BR:cill04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    122291798
Secretion system [BR:cill02044]
 Sec (secretion) system
  Eukaryotic Sec-SRP protein
   122291798
SSDB
Motif
Pfam: WD40_CDC20-Fz Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 WD40_Prp19 Beta-prop_EML_2 WD40_WDHD1_1st WD40 Beta-prop_RIG_2nd TPR_Sec16 WDR55 Beta-prop_EIPR1 SRA1 TPR_GEMI5 Beta-prop_EML WD40_MABP1-WDR62_1st MIOS_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR19_1st Prp18 Beta-prop_SCAP
Other DBs
NCBI-GeneID: 122291798
NCBI-ProteinID: XP_042955711
LinkDB
Position
13:909476..922742
AA seq 1128 aa
MACVKGVDRLASVALAPDSPYMAAGTMAGAVDLSFSSSASLEIFKLDFQSDDWELPLIGE
SPSSERFNRLSWGKAAAGSASEQFSLGLIAGGLVDGTIDVWNPLALIRAEANENALVGHL
LRHKGPVRGLEFNGITPNLLASGADDGEICIWDLANPTEPSHFPPLRGGNPAVQGEISFL
SWNSKVQHILASTSYSGTTVVWDLKKQKQVISFSDSVRRRCSVLQWNPDFATHLVVASDE
DTSPSVRLWDVRNVMSPLKEFTGHTKGIIAMAWCPVDSSYLITCAKDNRTICWDTVSGEI
VCELPAGTNWNFDVHWYPKMPGVISASSFDGKVGFYNIEGCSRHGVGESEVGTAPLRAPK
WCKRPVGVSFGFGGKLMWFCPRPSPAGVPAGGSEVYVLNLLTEDSLVSRSSEFETAIKNG
DRSSLRVLCDKKSLKSEAEDDRETWSFLKVMFEDDGTARTKLLAHLGFSAPANEKECVQD
ALSQEVNALGLEDTVTEKVGSVGDTEATIFPADNGEDFFNNLPSPKTDTPLSTSRGNFAI
VDTAHDSNQLQQEPNVFEESADQAFDDGVQHALIVGDYKGAVAQCISANKMADALVIAHV
GGASLWESTRDQYFRTNLSPYLKFHSQVVSAMVNNDLLSIVNTRPLKFWKETLALLCSFA
QREEWTMLCDALALKLMNAGNTLAATLCYICAGNIDKTLEIWSRSLQTEHEGKSYVDLLQ
DLMEKTIVLVLATGQKQFSASLYKLVEKYAEILASQGLLTTAMEYLKLLGSDGLSPELVI
LRDRIAFSTEPEKEATGMAFESSQTQSAAIYGADQSNFGLVDSSQSYQQETAPLHMQPSG
PSNPYGGNYQHPASSPYGGGYGAPTSYQPPNIFLPSQTTSQPNFPAPPVTTQPVVRPFIP
ATPAALKNVEQYHQPTLGSQLYPGATNPTYQPIRPGTGSAAPVTSQPSAFPGHRMPQEVA
PTPPPRGFIPVNSGVVQRPGIGSMQPRSPTQAASAQPTVTPAAPPPTVQTVDTSNVPVHQ
KPVIATLTRLFNETSEALGGSRANATKKREIEDNSRKLGALFAKLNSGDISKNAAEKLVQ
LCQSLDNGDFSTALQIQVLLTTSEWDECNFWLNTLKRMIKTRQNVRLN
NT seq 3387 nt   +upstreamnt  +downstreamnt
atggcttgtgtaaaaggagtggatagattggcgtcagtggcgttggcgccggactcgccc
tacatggcggcggggacaatggccggggctgtggatctgtctttcagctcttccgcgagc
ctcgagatcttcaagcttgatttccagtccgacgattgggagcttcctcttatcggcgag
tcgccgagctccgagcgcttcaaccgcctctcctggggcaaggccgctgccggatccgct
tccgagcagttctctctcggtctcatcgcaggtggacttgttgacggtaccattgatgtc
tggaaccccctcgctctgatccgtgctgaagcaaatgaaaatgctcttgttggacatctc
ttgcggcataaaggaccagtacgtggtcttgaatttaatggcattacaccaaacctgctt
gcatctggggctgacgatggtgaaatttgcatctgggatttggcaaaccctacagaacct
tcacattttccacccctgcggggtggcaatcctgctgtgcagggagaaatttcgttttta
tcttggaatagtaaggttcaacatatattggcatccacatcatatagtgggacaactgtg
gtttgggacctaaagaagcaaaaacaagttataagcttttcagactcggttagaaggcgg
tgctctgttttgcagtggaatcctgattttgcaactcatcttgttgttgcatcggatgaa
gatacttcaccctccgtgaggctgtgggatgtgcgaaatgtaatgtcaccacttaaagag
ttcacgggacatactaaaggtataattgcgatggcgtggtgtcctgttgacagttcctat
ttgattacttgtgccaaagataatcgaactatttgctgggacactgtttctggggagatt
gtctgtgagttgcccgctggcaccaactggaattttgatgtacactggtatccaaagatg
cctggggtcatatcagcatcttcatttgatggaaaagttggcttttataacattgagggt
tgcagtcggcatggtgttggcgagagtgaggttggtacagctcctctgagggctccaaaa
tggtgtaaacgtcctgttggtgtgtcttttggctttggtggcaagcttatgtggttttgc
cctaggccctctccggcaggtgtgccagctggtggttcagaggtttatgtgctcaactta
ttaactgaagacagtttggttagtcgatcatctgagtttgaaactgcaataaaaaatggg
gataggtcttcactgagggtactatgcgataaaaaatcactaaaatctgaagcagaggat
gaccgtgaaacatggagcttcttgaaggttatgtttgaagatgatgggacagcaagaaca
aagctgcttgcccacctaggtttcagtgcccctgctaatgaaaaagagtgtgttcaagat
gctctttcccaggaagtaaatgcacttggacttgaggatacagtaactgagaaggttgga
tctgtgggtgatacagaagcaaccattttccctgctgataatggtgaagacttctttaac
aatctccctagccccaagactgatacgccattgtccacctctcgtggtaactttgctatt
gtggatactgcacatgattcgaaccagttgcaacaggaaccaaatgtatttgaggagagt
gctgaccaagcatttgatgatggcgtccaacatgcgttaattgttggagattataagggg
gcagttgcacagtgcatatctgcaaataaaatggctgatgctttagttattgctcacgtt
ggtggtgcatccttgtgggagagcactcgtgatcaatactttaggacaaacctttcacct
tacctaaagtttcactctcaggttgtttctgctatggtgaacaatgatctcctgagcatt
gtcaataccagacccctgaaattctggaaagaaacacttgctcttctctgtagttttgca
cagagagaggaatggactatgctctgtgacgcacttgctttaaaactaatgaatgctggt
aacacgttggctgctactctctgttacatatgtgccggaaatattgataagactctggaa
atttggtcaaggagtcttcaaaccgagcatgaagggaaatcctatgtcgatcttcttcag
gatttgatggaaaagactattgttcttgtcttggcaactgggcaaaagcaattcagtgca
tctttgtataagcttgttgagaagtatgctgaaattttagcaagccaagggcttttaaca
acagcaatggagtaccttaaacttttaggctctgatggattgtcacctgagcttgtgata
ttaagagatcgtattgcattctctacagaacctgagaaagaagccacaggtatggccttt
gagagctctcaaacacaaagtgcagcaatatatggtgctgatcaatccaattttggcttg
gttgattcctctcaatcttatcaacaggaaacagcaccattacatatgcagccaagtggt
cctagcaatccatatggtggaaattatcagcatcctgctagttctccatatggaggggga
tatggtgctcctacctcatatcagccaccaaatatattccttccatcccagacaacttcc
cagccaaattttccggcacctcctgtcaccactcaacccgttgtgaggccgtttattcct
gcaactcctgctgcacttaaaaatgtggagcaatatcaccagcccacattgggttctcag
ctttatcctggagccactaaccctacttatcaacccattcgacctgggactggttcagct
gcccctgttacatcacaacccagtgcatttcctggccatagaatgccacaggaggtagct
cccaccccacccccaaggggatttattccggttaattcaggggttgttcaaagacctggg
attggttcaatgcaaccacgcagtcctactcaggcagcttctgcacaaccaacagttacg
cccgcagctccaccacccacagtgcaaacagttgatacatcaaatgtaccagtccaccaa
aagcctgtcattgcaacattgacaagacttttcaatgagacatcagaagcgctaggtggt
tcacgggcaaatgcaactaagaagcgggaaatagaagacaattccaggaaactaggtgcc
ttgtttgcaaaactgaatagtggggacatatccaaaaatgctgctgaaaagctcgttcag
ctctgccagtctttagacaatggtgatttcagtaccgctcttcaaatccaggtattactt
acaaccagtgagtgggacgagtgcaacttctggctaaatacactaaagcgaatgatcaag
acaaggcagaatgtgagattgaactaa

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