Carya illinoinensis (pecan): 122291815
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Entry
122291815 CDS
T08745
Name
(RefSeq) coronatine-insensitive protein 1
KO
K13463
coronatine-insensitive protein 1
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
122291815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cill04121
]
122291815
Ubiquitin system [BR:
cill04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
122291815
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Gene cluster
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
F-box-like
LRR_At5g56370
F-box
Motif
Other DBs
NCBI-GeneID:
122291815
NCBI-ProteinID:
XP_042955742
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All DBs
Position
1:complement(56767230..56772552)
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AA seq
590 aa
AA seq
DB search
MEDRNVSRVRPGMSEVVIGCVMPYIHDPKDRDAVSLVCRRWYELDALTRKHVTIALCYTA
SPDRLRRRFRHLESLKLKGKPRAAMFNLIPEDWGGYVTPWMNEIAESFNCLKSLHFRRMI
VRDSDLELLAQSRGRVLQALKLDKCSGFSTDGLLHIGRSCRSLKTLFMEESSISNRGGEW
LHELAVNNMVLETLNFYMTDLVVSFEDLELIARNCRSLVSVKVSDCEILGLLRFFCAAPA
LEEFCGGSFNEQPDNYSCVSLPPKLCRLGLTYMGKIEMPIVFPCAPLLKKLDLLYALLDT
EDHCMLIQRSPNLEILETRDVIGDRGLEVLARSCKRLKRLRIERGADEQGMEDEEGVVSQ
RGLIALAQGCLELEYLAVYVTDITNASLEYIGKYSKNLCDFRLVLLDREESITDLPLDNG
VRDLLRGCEKLKRFALYLRPGGLTDVGLSYVGQYSKNIRWMLLGYVGESDTGLLDFSRGC
PSLQKLEMRGCCFSERALAAAVLQLTSLRYLWVQGYKATSATGCDLLAMARPFWNIELIP
SRRVVVADQLEGAVLVEHPAHILAYYSLAGPRTDFPDTVIPLDPEESLVT
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggaggatcgaaacgtctccagagtgcgtcccggaatgtctgaggtggttatcggctgc
gtgatgccgtatattcacgaccccaaggaccgggatgcggtttccctggtgtgccggcgc
tggtacgagcttgacgcgctgacgcggaagcacgtgacgatcgctctatgctacacggcg
agccccgatcgattgcgccggaggtttcggcacctggaatcgctgaagctgaaggggaag
ccgagggccgcgatgttcaatctgatacccgaagattggggaggttacgtcactccctgg
atgaacgagatcgccgagtctttcaattgcttaaagtcgcttcacttccggcgaatgatt
gtgagggactccgatctcgagcttcttgctcagtctcgcgggcgcgttcttcaggcgctc
aagctggataaatgttctggcttttctacggatggtcttctgcatatcggtcggtcctgc
aggagtttaaaaactttgtttatggaggagagctcaataagtaatcgtggtggtgaatgg
ctacatgagcttgctgtgaacaacatggttcttgaaactttgaacttttatatgacggat
cttgtagtcagctttgaagaccttgaactcatagccagaaattgtcgttctttagtttcc
gttaaagttagtgattgtgaaatcttgggcctcctgcgtttcttttgtgctgcccctgct
ttagaagaattttgtgggggttccttcaatgagcagccagacaattactcatgtgtatca
ttacccccaaagttgtgccgtttggggctaacatacatggggaagattgaaatgccaatt
gtattcccctgtgcgcccctactcaaaaaattggatctcctatatgcactgcttgacaca
gaggaccattgtatgttaatccaaaggagccccaacttagaaattcttgagacaagggat
gttattggagatagaggattggaagttcttgctcggagttgtaagagactaaagaggctt
agaattgagcgaggtgctgatgagcagggcatggaggatgaagaaggtgtagtttcacag
agaggtttgattgctttggctcagggctgcctagaactggaatacttggctgtttatgtt
actgatatcacaaatgcttctttggagtatatcggtaaatactctaaaaatctctgtgat
ttccgcctagtcttgcttgaccgagaagagagtataacggatttgcctctggacaatggg
gttcgagatctgttgaggggatgtgaaaagctaaaaaggtttgcattgtatctccgacct
gggggcttgactgatgtgggtctcagttatgttgggcaatacagcaaaaatataagatgg
atgcttctaggttatgttggggagtctgatacggggcttctggatttttctagaggctgt
cccagcttgcaaaagttagaaatgaggggctgctgcttcagtgagcgtgcactggctgct
gctgtattgcagctgacttctctgaggtacctatgggtgcaaggatataaagccacctct
gcaacgggttgtgaccttctggcaatggctcgcccattctggaatattgaattaattcct
tctagacgagttgttgtcgcggatcaacttgagggggctgttctggttgagcatcccgcc
catatacttgcatattactcccttgctggaccaagaacagattttccagatactgtcatt
cctttggatccagaggaatccttggttacttag
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