Carya illinoinensis (pecan): 122291816
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Entry
122291816 CDS
T08745
Name
(RefSeq) SAGA-associated factor 11
KO
K11363
SAGA-associated factor 11
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cill03021
]
122291816
03036 Chromosome and associated proteins [BR:
cill03036
]
122291816
Transcription machinery [BR:
cill03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
122291816
Chromosome and associated proteins [BR:
cill03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
122291816
SLIK complex
122291816
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sgf11
Lar_N
Paired_CXXCH_1
Motif
Other DBs
NCBI-GeneID:
122291816
NCBI-ProteinID:
XP_042955739
LinkDB
All DBs
Position
13:7542116..7545450
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AA seq
170 aa
AA seq
DB search
MASHAQLSSHFFGDLLDSIIVDVASECHRIARLGLDRNLEEEEEELKLSAQARERVTDPN
NSGEANSKYVVDIFGQTHPPIASDVFECMNCHRPIMAGRFAPHLEKCMGKGRKARFKGTR
SSTAAQNRHSRGSPVSTYPPYPNSTSTNQLSNGTSGVAGEEYSNGTFPEP
NT seq
513 nt
NT seq
+upstream
nt +downstream
nt
atggcttctcatgctcagctttcatctcatttttttggggatctccttgattccattatt
gttgacgtggcatctgagtgtcatcgaatagcaaggttgggccttgatcgtaatttggaa
gaagaggaagaagaactgaagctttcagcacaagctcgggaaagggtaactgatcctaat
aacagtggtgaagctaatagcaagtatgtggttgacatatttggacaaactcatcctcct
atagccagtgatgtatttgagtgcatgaattgtcatcgtcctatcatggctgggagattt
gctcctcatttggagaagtgcatgggaaagggtagaaaggctcgattcaagggaacaaga
agtagcacagccgcacagaaccggcattcacgagggagccctgtttctacataccctcct
tacccaaattccaccagcacaaaccagttatcaaacggaacatccggtgttgcaggtgag
gagtactcaaatggcacatttccagaaccatga
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