Carya illinoinensis (pecan): 122291825
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Entry
122291825 CDS
T08745
Name
(RefSeq) protein argonaute 4
KO
K11593
eukaryotic translation initiation factor 2C
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cill03019
]
122291825
03036 Chromosome and associated proteins [BR:
cill03036
]
122291825
Messenger RNA biogenesis [BR:
cill03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
122291825
Chromosome and associated proteins [BR:
cill03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
122291825
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
122291825
microRNA pathway
RISC loading complex
122291825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
122291825
NCBI-ProteinID:
XP_042955756
LinkDB
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Position
13:complement(20018268..20027411)
Genome browser
AA seq
922 aa
AA seq
DB search
MDSFEPDDNGATNGNGAQEALPPPPPVIPPDVVPVCAEPEHRPEPVKKKVVRVPIARRGL
GSKGQKITLLTNHFKVMVTNVEGHFFHYSVSLSYEDGRPVDGKGIGRRVIDRVQETYDTE
LAGKDFAYDGEKSLFTVGPLPRNKLEFTVVLEDIQSNRNNGNRSPDDRGSPNESDRKRMR
RPYQSKTFKVEISFAAKIPMQAIANALRGQESENSQEALRVLDIILRQHAAKQGCLLVRQ
SFFHNDPRNFADVGGGVLGCRGFHSSFRTTQGGLSLNIDVSTTMIIQPGPVVDFLIANQN
VRDPFSLDWSKAKRTLKNLRIKTSPANTEYKITGLSEKPCKEQTFTLKQRNGKDVDGDNT
IEVTVYDYFVNHRGIELRYSADLPCINVGKPKRPTYFPLELCSLVSLQRYTKALSVLQRS
SLVEKSRQKPNERMKTLSDALKSNNYDSEPMLRSCGISISTSFSQVEGRVLPAPRLKVGN
GEDFFPRNGRWNFNNKKLAQPTKIQRWAVVNFSARCDTQGLVRDLIKCGEMKGILIDPPF
DVFQENPQNRRAPPVVRVEKMFEDIQSKLPGAPQFLLCLLPERKNSDLYGPWKRKNLAEL
GVVTQCMAPTRVNDQYLTNVLLKINAKLGGLNSLLAVEHSPSIPVVSKAPTIILGMDVSH
GSPGQSDMPSIAAVVSSRQWPLISKYRASVRTQSPKVEMIDSLFKQVAETEDDGIVRELL
LDFYTSSGKRKPDQIIIFRDGVSESQFNQVLNIELDQIIEACKFLDEKWSPKFVVIVAQK
NHHTKFFQQGSPDNVPPGTIIDNKICHPRNNDFYLCAHAGMIGTTRPTHYHVLLDEVGFS
SDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAATQIGQFIKFEDMSETSSSHGGLTSV
GAVPVPQLPRLQENVCNSMFFC
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atggattcattcgagccagacgataatggggcaacaaatggaaatggagcacaggaagca
ctgccacctcctcctcctgttatcccaccggatgttgttccagtgtgtgctgaacctgaa
caccgtcctgaacctgttaagaaaaaggttgtgcgagttcctatagctaggcgtgggctt
ggaagcaaagggcaaaagattactctgcttactaatcacttcaaagttatggttactaat
gttgagggccatttcttccactatagtgtttctttgagttatgaagatgggcgccctgta
gacggtaaaggtattggaagaagggtgattgatagggtgcaggagacttatgacactgag
ttagcgggaaaggactttgcttatgatggggagaagagtttgttcactgttggtccactg
ccccgcaacaaacttgagtttactgttgtacttgaggatattcagtcaaacagaaacaac
ggaaaccgtagccctgatgaccgaggaagtccaaatgagagtgacagaaaaagaatgcga
cgtccatatcagtcaaagacattcaaagtagaaattagctttgctgccaagattcccatg
caggccattgcaaatgcgttacgtggtcaagagtctgagaactcacaagaagcccttaga
gtgctggatattatattgagacagcatgctgctaaacagggctgcctccttgttcgccaa
tcattctttcacaatgatccaagaaattttgcagatgtaggaggtggtgttcttggctgc
agaggatttcattctagttttaggaccacacagggtggcttatccctgaatattgatgta
tcaactaccatgattatacagcctgggccggtggtagattttttaattgccaaccagaac
gtgagggatccattttcacttgattggtcgaaggcgaaacgaacgctcaagaatcttagg
attaaaacaagtccggccaatacagagtacaagataaccggtttgagtgagaaaccttgc
aaagagcaaacatttaccctgaagcagagaaatggcaaggatgtagatggtgacaataca
atagaagtgactgtttatgattattttgttaaccatcgtggtatagaattgcgttactct
gcagacctaccatgtatcaatgttgggaagccaaaacgtccaacttatttccctcttgag
ctttgttcgttggtgtccttgcaacgatacacaaaagctctatcggtgcttcaaagatct
tcactagtggaaaaatcgagacaaaagccgaatgagaggatgaagactttgtctgatgct
ttgaaaagcaacaattatgattctgaacctatgctgcgatcatgtggcatttcaattagt
accagcttctctcaagtggaaggtcgtgttctgccagcaccaaggttgaaagtggggaat
ggggaggatttctttcctaggaatggaagatggaacttcaacaataagaaattagcgcag
ccaaccaagatacaaagatgggctgttgtgaacttctctgcgcgttgtgatacacagggt
cttgtacgagatctgataaaatgtggagaaatgaaaggaattcttatagatcctccgttc
gatgtctttcaagagaatcctcaaaatagacgggctcccccggtggttagagttgagaag
atgtttgaggatatacagtcaaaacttcctggtgctccacagtttcttctttgcttgctt
cctgagaggaaaaactcagatctatatggtccgtggaaacggaaaaatcttgctgagctt
ggagtagtcacccagtgcatggctcctacaagggttaacgatcaatatcttaccaatgtt
cttttgaagatcaatgcaaagttgggtggtttgaattcgttactagctgttgagcactct
ccatccatccctgtggtttccaaggctcccaccatcatacttggaatggatgtgtcacat
ggctctcctgggcagtctgacatgccgtcaattgctgcggtcgtcagctcaaggcagtgg
ccattaatttctaaatatagggcttctgttcgcacacagtccccaaaggttgaaatgata
gattctctgttcaagcaggtggcggaaactgaagatgatggcatagtgagggagcttctg
ctagacttctatacgagttcagggaaaaggaaacctgatcagatcataatattcagggat
ggagtaagtgagtcgcaattcaaccaagtcttgaacattgaactggaccaaataattgag
gcctgcaaatttcttgatgagaagtggtcccccaagtttgtagtaattgttgcacagaaa
aatcaccatacaaaattcttccagcaggggtctcctgataatgttccacctgggacgatt
attgataacaaaatctgccatccaagaaacaatgatttctatttatgtgcacatgctgga
atgattgggaccactaggcctacacattaccatgttctattagatgaggttggcttttca
tcagatgatctacaggaacttgtgcattccctatcatatgtgtatcaaagaagcactact
gcaatatctgtagttgctcccatatgctatgcgcacttggctgccacccaaattggacag
ttcataaaatttgaagacatgtctgagacgtcatcaagccatggtgggttgacatctgtt
ggagctgtccctgtgccacagctgcccagattacaggagaatgtctgcaactctatgttc
ttctgttga
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