Carya illinoinensis (pecan): 122291885
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Entry
122291885 CDS
T08745
Name
(RefSeq) elongation factor-like GTPase 1
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
122291885
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cill03009
]
122291885
Ribosome biogenesis [BR:
cill03009
]
Eukaryotic type
Pre-60S particles
GTPases
122291885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFG_C
EFL1
EF-G_D2
GTP_EFTU_D2
EFG_III
SRPRB
EFG_IV
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
122291885
NCBI-ProteinID:
XP_042955852
LinkDB
All DBs
Position
13:complement(28848349..28852114)
Genome browser
AA seq
1034 aa
AA seq
DB search
MGESESDPDSETRKIRNICILAHVDHGKTTLADHLIAASGGGVLHPKLAGRLRFMDYLDE
EQRRAITMKSSSIALHYKNHSINLIDSPGHMDFCSEVSTAARLSDGALILVDAVEGVHIQ
THAVLRQCWIEKLSPCLVLNKIDRLIFELRLSPMEAYTRLSRIVHEVNGIVSGYKSEKYF
SDVDAVLSGPSGDMGDEESSEFVEDDEEDTFQPQKGNVAFVCALDGWGFGIHEFAEFYAS
KLGASTAALQKALWGPRYFNPKTKMILGKKAIGGGNKARPMFVQFVLEPLWQVYQAALDA
DGNKGMLEKVIKSFNLSVPAREVQNKDQKVVLQSVMSRWLPLSDAILSMVIKCMPDPIAA
QSFRISRLLPKRELLDDQVDSNVLAEAELVRKSIEACDSRHEAPCVTFVSKMFAVPLKML
PRDSHGMIIYGPGEEGGEGESSECFLAFARVFSGVLYSGQRVFVLSALYDPLKGESMQKH
VQEAELQSLYLMMGQGLKPVASVKAGNVVAIRGLGQHILKSATLSSTKNCWPFSSMIFQV
APTLRVAIEPSDPADIGAVLKGLKLLNRADPFVEVTFSARGEHVLAAAGEVHLERCIKDL
KERFAKVSLEVSPPLVSYKETIEGEVTHMLENLKSFNGGSEYVEKTTPNGRCVVRVHIMK
LPPALTKVLDESSDLLADIIGAKSGQTYKSLETQRPSIVEDENPIELLKKRIMDAVDKDI
LSMTEIDKERADKSRAKWLKLLRRIWALGPRHIGPNFLFVPDFKRKGADNCVLIRGSSYV
SERLGFVDDSIDGDTAAETSSEATRVLSMEAERLESSVVSGFQLATAAGPLCDEPMWGLA
FVVEAYISPFCGQADESETSHQQPEQYGIFTGQVIAAVKDACRAAVLQKKPRLVEAMYFC
ELNTPPEHLGPMYAVLGRRRARVSKEIMQEGSPLFTVHAYVPVSESFGFADELRRWTSGA
ASALLVLSHWEALPEDPFFIPKTEEEIEEFGDGSSVPPNTARKLIDAVRRRKGLPVEEKV
VQHATKQRTLARKV
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaatctgagtctgatcccgattccgagactcggaaaatccgaaacatatgcata
ctggcacacgttgatcacggcaaaacaacacttgccgaccatttgatcgccgcttcgggt
ggcggcgtgctccaccctaagctagcgggccgcctgcgttttatggactatctagacgag
gaacaaaggcgtgccatcactatgaagagctcgtccattgctcttcactacaagaaccac
tctattaaccttatagactcccctggccatatggacttctgtagtgaggtgtccactgcc
gctagactaagtgatggagccttgatattggttgacgctgtggagggcgtccatattcaa
acccatgctgttctgaggcaatgctggatagaaaagctatcgccatgtttggtacttaac
aagattgataggttgatttttgagttgaggttgagtccaatggaggcctatacccggttg
tcaaggattgttcatgaggttaatgggattgttagtgggtataagtcggagaagtatttt
tctgatgttgatgcggtgctctcagggccgtcaggggacatgggtgatgaggagagtagt
gagtttgtggaggatgatgaggaggatacgtttcaaccccagaaggggaatgtagctttt
gtatgtgccttagatgggtggggttttggaattcatgagtttgctgagttctatgcttca
aagcttggggcaagtactgctgcattgcagaaagctttgtggggtcctcggtatttcaat
ccaaagacaaagatgattttgggaaagaaggcaattggtggaggaaataaggcaaggcct
atgtttgttcagtttgtgcttgaaccgctttggcaggtttaccaggcggctttggatgct
gatgggaacaaagggatgctggagaaagtgatcaagtcatttaatttgtcagtgccggct
cgtgaggttcagaacaaggaccaaaaggttgtgcttcaatctgttatgagccgttggctt
cctctgtctgatgcaatattatctatggtgattaagtgtatgccagaccctattgcagca
cagtcatttcgtatttcacgtttgctgcctaagagagagctcctcgatgatcaggttgat
tccaatgtgcttgcagaagcagaactggtaagaaaatccattgaggcttgtgattcgagg
catgaagctccttgtgtcacttttgtttccaagatgtttgctgttccgctgaaaatgctc
ccaagagattcacatggaatgattatatatggtccaggtgaagaaggtggagagggtgag
tcaagtgagtgtttccttgcatttgctagggtcttcagtggagtcctttattcgggacag
agggtttttgtgctttcagctttatatgatccattaaaaggggaatcaatgcagaagcat
gtgcaggaggctgagttgcaatccttgtatctaatgatgggtcaaggcttaaaaccggtg
gcttctgtgaaggcagggaatgttgtggcaattcgaggccttggtcagcacatactgaaa
agtgcaactctgtcatccacaaagaactgctggcctttttcaagtatgatattccaggtt
gcaccaactctcagagttgcaattgaaccgtcagatccagcagatattggtgcagttttg
aaaggtttaaagcttctgaatcgggcagacccatttgtagaggtcactttttctgctagg
ggcgagcatgtactggctgctgcaggagaagttcatctggaaagatgcataaaggatttg
aaagagaggtttgcaaaggtaagcttggaagtctctccacctcttgtgtcctacaaagag
accatcgagggagaggtgacgcacatgctggagaatttgaaatctttcaatgggggatcg
gagtatgttgagaagacaacaccaaatggtagatgtgtagttcgggtgcatatcatgaag
cttccgcctgctttaactaaggtgcttgatgaaagttccgatttgcttgcagatattatt
ggagctaagtctgggcaaacctacaaaagtttggaaactcagagaccaagcattgtagaa
gatgagaatccaattgaattgcttaagaaacgcataatggatgcggtggataaagatatt
ttgtcaatgactgagattgacaaggaacgggctgacaaaagtagagcgaagtggctaaaa
cttctcaggagaatttgggcactcgggcctaggcatattggtccaaatttcctttttgtc
ccagatttcaaaagaaagggggctgacaactgtgttcttatacgtggttcctcttatgta
tcagagagattgggcttcgtggatgattctattgatggtgacacagctgctgagacatct
tcagaagcaactcgagtattatcaatggaagcagagcgtctcgagagtagtgttgtatct
gggtttcaacttgctacagcagccggacccttatgtgatgaacccatgtggggtttggca
tttgttgttgaggcttacatttcaccattttgtgggcaggctgatgagtcagaaacttcc
caccaacaacctgagcagtatggcatcttcacagggcaggttattgcagctgtcaaagat
gcttgtagggcggctgtgcttcagaagaaaccaagactcgtggaagccatgtacttttgt
gagttgaacacccctcccgaacatttaggtcccatgtatgcagtgctaggtcgaagacgg
gccagggtgagcaaggaaataatgcaggaaggttcaccactgttcactgtgcatgcatat
gtgccagtttctgaaagctttggcttcgcagatgagcttagaagatggacttctggagct
gctagtgctctgctcgtgcttagtcactgggaagcacttcctgaggatcctttctttata
cccaaaacagaggaggaaattgaggagtttggagatgggtctagtgtgcctccaaataca
gccaggaagctcattgacgctgtgagacgacggaaaggccttccggtggaggaaaaagta
gtccagcatgcaacaaagcagaggaccttggctcgtaaagtgtag
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