Carya illinoinensis (pecan): 122291927
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Entry
122291927 CDS
T08745
Name
(RefSeq) THUMP domain-containing protein 1 homolog isoform X1
KO
K06963
tRNA acetyltransferase TAN1
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cill03016
]
122291927
Transfer RNA biogenesis [BR:
cill03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
122291927
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Gene cluster
GFIT
Motif
Pfam:
THUMP
DUF908
Motif
Other DBs
NCBI-GeneID:
122291927
NCBI-ProteinID:
XP_042955916
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Position
13:complement(30131262..30147481)
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AA seq
381 aa
AA seq
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MTADTKSKSNGGGNNAIKGKKRKQRYLPHNKPVKRKGSYPLRPGVQGFFITCDGGRESQA
SHEAVNVIDSFYEEIVHGKDSGVKLAELPNKPLNKKIKFSYSESSSSGGDDDEEEEDEGQ
IISDTSQNDLASHSNATNEEPDPHTKVGMHHGNQTEEKANGIEVDGDKHENQPKETEEPP
TKKQCLETDASKHVIHEKVEETSIDRLIEAELKELGDKNKRHFVKLDSGCNGVVFIQMRK
IDGDPGPKDIVQHIMTSAASTRKHMSRFILRMLPIEVACYTSEEEISRAIKPLVAQYFPL
ETQNPQKFAVLFEARANSGIDRMKIINAVAKSVPGPHKVDLNNPDKTIVVEIIKTVCLIG
VVERYKGLAKYNLRQLTSPKP
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgacagcggacaccaagtcgaagtcgaacggtggtggcaacaacgccatcaagggcaag
aagagaaagcagcgctatcttccccacaacaagccagtaaaaaggaagggttcgtaccca
ttgcggcccggagtgcaaggattcttcattacctgcgacggaggccgggaaagccaggcc
tctcatgaagccgtcaacgttattgactctttttatgaagagatagtccacgggaaggat
tcaggtgtgaagcttgctgagttacccaataaacctttaaataagaagattaagttctca
tattccgagtcttctagtagtggtggtgatgatgatgaggaggaggaggatgaaggccag
attatatcagatacttctcagaatgatttagctagtcattcaaatgcaacaaatgaggag
cctgatcctcatacaaaagttggtatgcaccatggaaatcagacagaagaaaaagctaat
ggtattgaggtggatggtgacaaacatgagaatcaaccaaaagaaactgaggagccccca
acaaagaaacaatgtctagaaacagatgcatcgaaacatgttatccatgaaaaagtggag
gagacgtccattgataggctaattgaggctgaactcaaagagttgggagataagaataag
aggcactttgtcaagcttgattcaggatgtaatggtgttgtcttcattcaaatgcggaag
atagatggagaccctggtcccaaagatattgtgcagcacataatgacatctgctgcatca
acaaggaaacacatgtcgaggttcatcttaaggatgctacctattgaagtggcatgctat
acttcagaggaggaaatttcaagagcaataaaacctcttgtggcacaatattttccattg
gaaactcaaaacccacagaagtttgcggtactgtttgaagctcgtgcaaatagtggtatt
gataggatgaagatcataaatgcagttgcaaaatccgttcctggaccacataaagttgat
cttaacaatcctgacaaaaccattgtagttgaaattatcaagaccgtgtgcttaattggg
gttgttgaacggtacaagggattggctaagtacaacctgaggcagctcacatcacccaaa
ccttag
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