KEGG   Carya illinoinensis (pecan): 122292066
Entry
122292066         CDS       T08745                                 
Name
(RefSeq) splicing factor U2af small subunit B-like
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
cill  Carya illinoinensis (pecan)
Pathway
cill03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cill00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    122292066
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cill03041]
    122292066
Spliceosome [BR:cill03041]
 Complex A
  U2 snRNP components
   U2 related factors
    122292066
 Complex B
    122292066
SSDB
Motif
Pfam: zf-CCCH RRM_1 zf_CCCH_4 Torus zf-CCCH_4
Other DBs
NCBI-GeneID: 122292066
NCBI-ProteinID: XP_042956197
LinkDB
Position
13:complement(27687763..27691316)
AA seq 322 aa
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP
GVDAQGHPIDPRTIQRHFEEFYEDLFEELGKYGEIESLNVCDNLADHMVGNVYVQFREEE
HAANALRNLTGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISREL
RRQLFGRYRRRHSRSRSPYRHRSYEERSHGSHGSGRKYDERDRYYESRSRRHRSDSPGHK
RERSRSRSPGGRRNHSPVREGSEERRAKIEQWNREREQQQDNSSKVDNYGNNDGSYNRHM
QNGDQYDDYQQQRSPLQEGYNY
NT seq 969 nt   +upstreamnt  +downstreamnt
atggcggagcatctggcttcgatatttgggacagagaaggaccgtgtgaactgccccttc
tacttcaagatcggagcttgtaggcatggagaccgctgctcccgcctccataccaagccc
agcatcagccccactcttctcctctctaatatgtaccagcgccccgacatgatcaccccc
ggcgttgatgcccagggccaccccatcgacccccgcaccatacaaaggcatttcgaggaa
ttctacgaagatctgtttgaggagctaggaaagtacggagaaattgagagcctcaatgtt
tgcgataaccttgctgatcacatggttggtaatgtctacgttcagttcagagaggaggaa
catgctgccaatgctctccggaatcttaccggaagattttatgctggccgtcccatcatt
gtcgacttttctccggtgacagacttccgtgaagccacctgtaggcagtatgaggagaac
acatgcaaccgtggtggatactgtaattttatgcacttgaaaaggattagcagggagttg
aggcgtcaattgtttgggaggtaccgacgaaggcacagtcgcagtcgaagcccctatagg
catcgtagctatgaagagcgctctcacggaagccatggttcaggaagaaagtatgatgaa
agggaccgttattatgaaagtcggagcaggaggcataggagcgatagccctggccataag
agagaacgaagcagaagtaggagccctgggggaaggaggaaccacagtccagttagggaa
ggcagtgaggagagacgtgccaaaattgagcagtggaaccgggaaagggaacaacagcaa
gacaattctagtaaggttgacaattatggaaataatgatggcagttacaatagacatatg
cagaatggagatcagtacgatgactaccagcagcagcggagtccactacaagaaggatat
aattactga

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