Carya illinoinensis (pecan): 122292091
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Entry
122292091 CDS
T08745
Name
(RefSeq) polygalacturonase QRT2
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill00040
Pentose and glucuronate interconversions
cill01100
Metabolic pathways
Module
cill_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
122292091
Enzymes [BR:
cill01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
122292091
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
122292091
NCBI-ProteinID:
XP_042956239
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All DBs
Position
13:649469..653457
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AA seq
466 aa
AA seq
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MSPQINFLVLFIILGASFSSCFSSYQEGPLTIDHLDDTHGSDPRRAYTTSISNNTDHQQD
QDRDKHEPGFVDRIMMSAAKRFGMKRRLRRAQTPSTSQRLVSVDQFGAKGDGRDDTEAFR
KAWQAACSSANSVLVVPKYRNYHLKAITFSGPCKSDMTLMVYGTIKASSHRSDYAKDTRH
WLVFENIQNFVVEGGGSINGNGRKWWLNSCKINKNLPCTHAPTAVTFLGCNNLRVSNLRI
KNAQQMHVTFQNCDNVKALNLLVTAPGNSPNTDGIHVTGTQNINIENCVIRTGDDCISIV
SGSKNVRATDITCGPGHGISIGSLGADGSTDYVSNVIVDRARLSGTTNGVRIKTWQGGSG
YAKNILFQNIEMNNVSNPIIIDQNYCDQDTPCREQGSAVQISTVTYRNIQGTSASEDAVK
FQCSKSMPCEGISLQNVDLVRAGDADVQASCDNVGLANKGKVFPRC
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgtccccacaaatcaattttctcgtacttttcataatcttaggagcctccttctcatcc
tgttttagcagctaccaagagggcccacttacaattgatcatctagacgacactcatggt
tctgatcctcgtagagcctacaccacatcaataagcaataataccgatcatcaacaggac
caggatcgtgacaaacatgagcccgggtttgtggaccggatcatgatgtctgcggccaaa
aggtttggtatgaaaagaaggcttagacgagcacaaactccttcgacttcacaaaggctg
gtcagtgtagatcagtttggcgctaaaggtgacggaagagacgatactgaggcatttcgg
aaagcttggcaggcagcttgttcttctgcaaatagtgttcttgtggtccctaaatatcgg
aactaccatctcaaggcaattacattctcgggtccctgcaaatctgatatgacattgatg
gtctacggaacaatcaaagcttcttctcatagatcagattatgcaaaagatacacgacat
tggcttgtgtttgaaaatattcaaaactttgtagttgaaggtgggggctccatcaatggc
aatgggaggaagtggtggctaaactcatgcaaaattaacaaaaaccttccttgcacgcac
gcaccaactgctgtgaccttcctcggctgcaacaatttgagagtgtctaacctgagaata
aaaaatgcacagcaaatgcatgttacatttcagaactgtgacaacgtcaaagctttgaat
ctcttggtgactgcaccagggaatagtcccaatacggatggaattcatgttaccggaaca
cagaacattaatatcgaaaactgtgttatcagaacaggtgatgactgtatttccatagtg
tctgggtcaaaaaatgttcgagccacagacattacatgtggaccaggtcatggaataagc
attgggagcttaggagctgacggttccacagattatgtttcaaatgtgatagttgataga
gcaagactttcaggaactactaacggagtcaggattaaaacttggcagggaggctctggg
tatgccaaaaatatcctatttcaaaatatcgaaatgaacaatgtcagcaatcctataatc
atagatcaaaactattgcgatcaagatactccatgcagagaacagggctcggctgtgcaa
ataagcaccgtgacttacagaaacatccaaggcactagtgcatcggaggatgctgtaaaa
ttccagtgcagcaagagcatgccctgtgaagggatctcattgcaaaatgttgatctagta
cgtgcaggagatgcagatgtccaagcttcttgtgacaatgttggactggcaaacaagggg
aaagtctttccacggtgctga
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