Carya illinoinensis (pecan): 122292103
Help
Entry
122292103 CDS
T08745
Name
(RefSeq) transcription initiation factor TFIID subunit 7 isoform X1
KO
K03132
transcription initiation factor TFIID subunit 7
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
122292103
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cill03021
]
122292103
03036 Chromosome and associated proteins [BR:
cill03036
]
122292103
Transcription machinery [BR:
cill03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
122292103
Coactivators
SAGA/TFTC/STAGA complex
122292103
Chromosome and associated proteins [BR:
cill03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
122292103
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAFII55_N
PPR_2
PPR
PPR_1
PPR_3
DUF4611
Motif
Other DBs
NCBI-GeneID:
122292103
NCBI-ProteinID:
XP_042956258
LinkDB
All DBs
Position
13:34156661..34163089
Genome browser
AA seq
329 aa
AA seq
DB search
MKLCRRCQRRVCCWINKDFVTYNALLGGYGKQGKYGVVRRIFAEMKAEHVYRNLLTYSTL
IDVFSKGGLYREAVEVFREFKQAGLKADVVLYTTLIDAPCNMGWWFFRMCCFVCASCFAL
LNRILTNMEEQFILRVPPSVAERLDRLLSESENASSSEDKSLDLSFSEDGKSGTFVIAND
HFPASLLDLPSVVESYKTYDDSVLIKTADIGQMIMVREAGDPAPDMVEYRHGLTPSMRDA
RKRRFRREPDLNPELVQRVLKDLVKINAGATANNADAEVAEQEEDGEGNVRNVSKKPAPA
PAAKTDALEAGTNAGEPDRSDSDESDDSI
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgaaattatgtcggagatgccagcgaagagtatgttgttggataaataaggattttgta
acttataatgctcttctgggcggttatgggaagcaggggaagtatggtgtagtcagaaga
atatttgcagagatgaaagcagaacatgtatatcgtaatttgttaacgtattcaacattg
atcgatgtgttctcaaaaggcggtttgtacagggaggcagtggaggtctttagagagttt
aagcaggcagggttgaaagctgatgtggttctttatactacacttattgatgctccgtgt
aacatgggctggtggttcttcaggatgtgttgctttgtctgtgcttcttgttttgccttg
ctgaatagaatcttgactaacatggaagagcagttcatactcagagttccaccatctgtt
gcagagcgattagaccgccttctgagtgaaagtgaaaatgcatcatcttctgaagacaaa
tcattggatttgtccttttctgaggatgggaagagcgggacattcgtcattgccaatgat
catttccctgcatctcttctggatcttccttctgttgtggaatcatataaaacatatgat
gacagtgtgttgatcaagactgcagacattggtcagatgattatggttagagaagcaggt
gatcctgctccagatatggtggaatacagacatggtctcaccccttctatgagggatgct
cgaaagcggagatttcgcagggagccagatctaaatcctgagcttgtacagcgagtcttg
aaagatctagtgaagatcaacgctggtgcaacagccaataatgctgatgctgaagttgct
gaacaagaagaagatggagaaggaaatgttcgtaatgtgagtaaaaaacctgcgcctgcg
cctgctgcaaagactgatgccctagaagctggaactaatgctggggagcctgacagaagc
gactctgatgaatctgatgactcaatttga
DBGET
integrated database retrieval system
