Carya illinoinensis (pecan): 122292338
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Entry
122292338 CDS
T08745
Name
(RefSeq) elongation factor 1-alpha-like
KO
K03231
elongation factor 1-alpha
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122292338
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cill03019
]
122292338
03016 Transfer RNA biogenesis [BR:
cill03016
]
122292338
03012 Translation factors [BR:
cill03012
]
122292338
04131 Membrane trafficking [BR:
cill04131
]
122292338
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cill04147
]
122292338
Messenger RNA biogenesis [BR:
cill03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
122292338
Transfer RNA biogenesis [BR:
cill03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
122292338
Translation factors [BR:
cill03012
]
Eukaryotic type
Elongation factors
122292338
Membrane trafficking [BR:
cill04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
122292338
Exosome [BR:
cill04147
]
Exosomal proteins
Proteins found in most exosomes
122292338
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
AAA_22
FlpD
Motif
Other DBs
NCBI-GeneID:
122292338
NCBI-ProteinID:
XP_042956570
LinkDB
All DBs
Position
13:13356848..13359749
Genome browser
AA seq
447 aa
AA seq
DB search
MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL
DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT
GGFEAGISKDGQTREHALLAFTLGVRQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKK
VGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDLLQEPKRPSDKPLRLPLQD
VYKIGGIGTVPVGRVETGIIKPGMVVTFGPTGLTTEVKSVEMHHEALQEALPGDNVGFNV
KNVAVKDLKRGFVASNSKDDPAKEAANFTAQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF
AELLTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSEYPPLGRFAVRDMRQT
VAVGVIKSVEKKDPSGAKVTKSAAKKK
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaggagaagtttcacatcaacattgtggtcattggccacgtcgactctggaaaa
tcaaccacgactgggcatttgatctataagcttggaggtattgacaagcgtgttattgag
aggttcgagaaggaggctgctgaaatgaacaagaggtcattcaagtatgcttgggtgttg
gacaagcttaaggctgaacgtgagcgtggtattaccatcgacattgccttgtggaaattt
gagacaaccaagtactactgcactgtgattgatgcccccggacatcgtgacttcatcaag
aacatgattaccggtacctcacaggctgactgtgctgtcctcattattgactccaccact
ggtggttttgaagctggtatttccaaggatggtcagacccgtgagcatgccttgcttgcc
tttactcttggtgtcaggcagatgatatgctgctgcaacaagatggatgccacaacccct
aaatactccaaggcaaggtacgatgaaattgttaaggaagtctcatcctatttaaagaag
gttgggtacaaccctgacaagatccccttcgtcccaatctctggttttgagggcgacaac
atgattgagaggtcaaccaaccttgattggtacaagggccctaccctccttgaggcgctt
gacttgctccaagagcccaagaggccctcggacaagcctctccgtctgccactccaggat
gtttataagattggtggcattggaaccgtcccagttggacgtgtggagactggtatcatc
aagcctggtatggtggtgacctttggaccaaccggactgacaactgaagttaagtctgtt
gagatgcaccatgaagctctccaggaggcccttcctggtgacaatgttggcttcaatgtg
aagaacgttgctgtgaaggatctgaagcgtggttttgttgcttccaactccaaggatgat
cctgccaaggaggcagctaacttcactgcccaggtcatcatcatgaaccaccctggtcag
atcggcaatggttatgctccagtgctcgactgtcacacctcccacattgcggtgaagttt
gctgagctgttgaccaagattgacaggcgatctggtaaggagctggaaaaggagccaaaa
tttttgaagaacggtgatgcagggatggtaaagatgattcccaccaagccaatggttgtt
gagactttctcagagtatccacctcttggtcgtttcgctgtgagggacatgcgccagact
gtggctgttggtgtcatcaagagtgttgagaagaaggatccaagtggtgccaaggtcacc
aagtctgctgccaagaagaagtga
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