Carya illinoinensis (pecan): 122292433
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Entry
122292433 CDS
T08745
Name
(RefSeq) probable helicase CHR10 isoform X1
KO
K20092
chromodomain-helicase-DNA-binding protein 1-like [EC:5.6.2.-]
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cill03036
]
122292433
Chromosome and associated proteins [BR:
cill03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
122292433
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HDA2-3
ResIII
Motif
Other DBs
NCBI-GeneID:
122292433
NCBI-ProteinID:
XP_042956723
LinkDB
All DBs
Position
13:complement(2882724..2902941)
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AA seq
879 aa
AA seq
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MKYEQRLKAAAEIILASDSRTVDAPVNVADFGVTATLKPYQVEGVSWLIRRYTLGVNVVL
GDEMGLGKTLQAISLLSYLKVHEMSPGPFFIMCPLSVTDGWVSEIVKFAPNLKVLQYVGD
KEHRRGLRRTICEHVRAQSSSCNGVRLPFDILLTTYEIALMDQDFLSQIPWQYAVIDEAQ
RLKNPSSVLYKLLKERFLMPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLDQFLSTFK
EAGDPSSGHGAAELKEQFRSLKYILGAFMLRRTKSRLIECGNLELPPLTEITVMVPLVSL
QKKVYMSILRKELPKLLALSSGTSNHQSLQNIVMQLRKACSHPYLFPGIEPEPFEEGEHL
VQVSSKLMILDQLLHKLYDCGHRVLLFAQMTHTLDILQDFLELRKYSYERLDGSVRAEER
FSAIRSFSGQSVKGSLNSESDQNGSFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDK
QALQRAHRIGQMNHVLSINLVSRHTVEEVIMRRAERKLQLSHKVVGDDVMDSEGKNRAGV
ETGDLRSIIFGLQMFDPTEISTVNSDELQVSELDVIVEKVLAKRYEKIASKDDRKFEVNP
FDPLSEYDTVVGGSSTSISLDPGLDEASYLSWVEKFKEVPQSGSNPIPEFRSRREAHEEK
SLKLEAARKEAEEKKLRNWEALGYHSLTVKDPIDPVNGDMMSESGFLHFVYGDCTHPSRV
CPSEPTVIFSCVDDSGNWGHGGMFDALTKLSASIPNAYQRASEFGDLHPGDLHLIRINGD
CNEENADDCPPQWAALAVVQSYNSRRKVPRSKISLSDLECCLSKASFSAAQNSASIHMPR
IGYQDGSDRSDWYTVERLLRKYASAYGIKIFVYYYQRSS
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atgaagtacgagcagaggctcaaagccgctgcggaaatcatattggcgtccgattcacgc
accgtcgacgctccagtgaatgtcgcggactttggcgttacggccacgctgaaaccctac
caagttgaaggagtgtcatggctcataaggcgatacactctcggggtcaacgttgttctc
ggagatgagatgggactaggcaagacattgcaagctatctctttattgagctatttgaag
gttcatgagatgtctcctggaccatttttcataatgtgtcctctgagcgtgacagatggt
tgggtgtcagagatagttaaatttgctccaaacctaaaagttcttcagtatgttggtgat
aaagaacatcgccgaggtttgcgcaggacaatctgtgagcatgtaagagcacagtcttcg
tcatgcaacggcgtgcgattgccttttgacatactgttaacaacatatgaaattgccttg
atggatcaagattttctttctcaaataccatggcagtatgcagtaattgatgaagctcaa
agactcaaaaatccttccagtgttctctataagctcctcaaagagcgctttcttatgcca
agacggttgttgatgacgggcacacctatccaaaacaatctctctgaactttgggctttg
atgcatttttgtatgccttcagtctttgggacactagatcaatttctttccaccttcaag
gaagctggagatccttcatcaggtcatggtgcagctgaactcaaggagcaatttagaagt
ttaaaatatatattgggagccttcatgcttcgacgaacaaaatcaaggcttattgagtgt
ggaaatctagagctgccccctctcactgagataactgtaatggtgcccctggtcagcctg
caaaagaaggtttacatgtcaatattgagaaaggagcttcctaaactgcttgctttatct
tcaggaacttcaaatcatcaatccttacagaatattgtaatgcagctaagaaaagcatgc
agccatccttacctctttcctggtattgagcctgaaccctttgaagaaggggaacacctg
gtccaggtcagcagtaaactaatgattttggaccaactactccacaagctatatgattgt
ggacaccgcgtccttctctttgctcagatgacacatacacttgacattttacaggatttc
ctggagttacgaaaatattcctacgaacgtcttgatggatcagttcgagctgaggagcgc
ttctctgcaataagaagtttcagtgggcaatcggttaaagggagcttgaattctgaatct
gaccaaaatggttcatttgtttttatgatctctaccagagctgggggagttggcctgaat
cttgtggctgctgatactgttatattctacgagcaagattggaaccctcaagtggataag
caggctttacagagggcacacaggattggtcaaatgaatcatgttttgtctataaatcta
gttagcaggcatactgtggaggaggtcattatgcggagagcagagaggaagttgcagctt
agccataaagttgtaggggatgatgttatggactccgaaggtaaaaacagggcaggagtt
gaaactggtgatttgcggtctatcatatttgggttacaaatgtttgatcctaccgagatc
agcactgtgaattcagatgagttgcaggtgtctgaattggatgttattgttgaaaaggta
cttgcaaagcgatatgaaaagattgcaagcaaggatgataggaaatttgaggtcaatcca
ttcgatccattaagtgaatatgatactgttgttgggggaagttccacctcaataagttta
gatcctggtcttgatgaggcttcatatctttcctgggttgagaaattcaaggaggtgcca
caatctggtagtaacccaatcccagagtttcgaagtagaagggaggctcatgaggaaaag
tctctaaaacttgaggctgcaaggaaagaggctgaggagaagaagttgcgtaattgggaa
gcccttggataccactcgttgactgtaaaagaccctatcgaccctgtgaatggtgatatg
atgtcagaatcaggtttccttcattttgtttatggagattgtactcatccatcaagagtt
tgtccatccgagcctactgttatcttcagttgtgttgatgactctggaaactggggccat
ggtggaatgttcgatgcactgaccaaactttccgcaagtatccccaatgcatatcaacgt
gcttctgaatttggggacctgcatcctggtgatctgcatcttataagaattaatggggat
tgcaatgaggagaatgcagatgattgtcctcctcaatgggcagctttggctgttgtacaa
tcttacaattctaggcgtaaagtccctcgtagcaagatctctctttctgacttggaatgc
tgcttatcaaaggcatcattctcagcagctcaaaactctgcttcaatccacatgccacgg
attgggtatcaagatggatcagatcgctcagattggtacaccgtggaacgtcttctacga
aaatatgcttctgcatatggcataaaaatttttgtgtactattaccaacggtcgagttga
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