Carya illinoinensis (pecan): 122292598
Help
Entry
122292598 CDS
T08745
Name
(RefSeq) lysine--tRNA ligase, chloroplastic/mitochondrial
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
122292598
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cill01007
]
122292598
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cill03016
]
122292598
Enzymes [BR:
cill01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
122292598
Amino acid related enzymes [BR:
cill01007
]
Aminoacyl-tRNA synthetase
Class II (A)
122292598
Transfer RNA biogenesis [BR:
cill03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
122292598
Prokaryotic type
Other AARSs
122292598
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
WelO5
Motif
Other DBs
NCBI-GeneID:
122292598
NCBI-ProteinID:
XP_042956961
LinkDB
All DBs
Position
13
Genome browser
AA seq
587 aa
AA seq
DB search
MEALKLSSQPFRHLFRFATSTASAATRSRIGFLRCSSSSSSSSAAIATATSGRNRRSSSS
SSTSDRDAVRSIRITKVEELRSKGLEPYAYKWDRTHTANQLQDMYRHLGNGDESNSESDH
VSIAGRIVARRAFGKLAFLTLRDDSGTIQLYCEKERLVNDQFDQLKTLVDIGDILGASGS
IKRTEKGELSIYVNSFAILTKSLLPLPDKYHGLTDVDKRYRQRYVDMIANPEVADIFRKR
AKIVSEIRKTVESLGFVEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRM
LVGGFEKVYEIGRIFRNEGISTRHNPEFTTIEMYEAYSDYQSMMNMVEEIVTRCALSVHG
KLTIDYQGVEICLERPWRRETMHNLVKESTGIDFNDLVNDVKAAKEITLRALEINLDKKD
KCSIEACPSVGHLLNEVFEIVVEPKLLQPTFVLDYPIEISPLAKPHRRHAGLTERFELFI
CGRELANAFSELTDPMDQRGRLEEQVRLHNEKRAAAAREANSAEERGNKNEDDSYEVTLD
DDFLTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPVLKIQQ
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggaggctttgaagttgagttcgcagcctttcagacacctctttcgcttcgcaacttct
actgcctccgctgccacacgctccagaattggatttctcaggtgctcctcctcctcctcc
tcatcttccgccgccatcgcaaccgctacctccggtcgtaaccgtcgatcttcctcttct
tcttccacttcggacagagatgccgttcgctccattcgcattactaaggtggaagaattg
aggagcaagggcttggagccgtatgcttataagtgggataggactcacactgctaaccag
ctgcaagatatgtatagacatcttgggaatggcgacgagtcgaatagtgagagcgatcat
gtttcgattgcaggaagaattgtggctcgcagagcattcggaaaactcgcctttttgacg
ttacgcgatgattccgggacaattcagctttattgcgagaaggagaggcttgtaaatgat
caatttgatcagttaaagacacttgttgatattggtgatatactaggtgcaagtggttca
atcaagcggacagagaaaggagaactttctatttatgtgaattcatttgccattttgacc
aaatctctacttccactgccggataaatatcatggtctaactgatgtggataagcgctac
cgccaaagatatgtagacatgattgccaatcctgaagtagctgatatatttcggaaaaga
gcaaagattgtgtcagagatacgcaagacagtggaatctttaggtttcgttgaagttgaa
actccagttctgcagggagcagctggtggagcagaagctaggccatttgttacataccat
aattctcttggaagggacctttatttgagaatagcgactgagcttcacttaaagagaatg
ttggttggggggtttgagaaggtatatgagattgggagaatatttagaaatgaaggcatt
tcaactcgtcataatcctgagtttaccacaatagagatgtatgaagcatattcagactac
caaagcatgatgaacatggtggaggaaattgttactagatgtgctctttcagttcatggg
aagcttaccattgactaccagggtgtggagatatgtcttgagcgaccttggaggagggaa
actatgcacaatcttgtaaaagaatccaccggaattgatttcaatgatttggtcaatgat
gttaaagctgctaaagaaataactcttagggccctagaaatcaaccttgataagaaagac
aaatgttctattgaagcatgcccatctgttggccacctccttaatgaggtttttgagatt
gttgtagaaccaaagcttctgcaacctacatttgttttggactatcctattgagatttct
cctctggctaaaccacatagaaggcatgcagggctaacagagagatttgaacttttcatc
tgtggtcgtgagctggcaaatgcattttctgaattgactgatcctatggatcagagagga
cgcttggaagagcaagtgaggctgcataatgagaagagagcagcggctgctagggaagca
aatagtgcagaagagcgaggtaataaaaatgaggatgactcatatgaagtgactcttgat
gatgacttcctaacggctctggaatatggaatgcctcctgcttcaggaatgggacttgga
attgacaggctagtgatgcttctgacaaactctgcaagcattcgagatgtaattgctttc
ccagttcttaagattcagcaatag
DBGET
integrated database retrieval system
