Carya illinoinensis (pecan): 122292625
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Entry
122292625 CDS
T08745
Name
(RefSeq) eukaryotic translation initiation factor 4G isoform X1
KO
K03260
translation initiation factor 4G
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cill03019
]
122292625
03012 Translation factors [BR:
cill03012
]
122292625
Messenger RNA biogenesis [BR:
cill03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
122292625
mRNA cycle factors
Stress granule specific factors
122292625
Translation factors [BR:
cill03012
]
Eukaryotic type
Initiation factors
eIF-4
122292625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
MA3
Rep_fac_C
Motif
Other DBs
NCBI-GeneID:
122292625
NCBI-ProteinID:
XP_042956999
LinkDB
All DBs
Position
13:2202496..2211165
Genome browser
AA seq
1915 aa
AA seq
DB search
MSHNQYRSDKSETTQYRRTDRRSASSNQQRGSSGAYGKGGGPAPSPSHNLSSLRSVKKNN
NNAQGGGQSRTSLPTVNSSSLESSNASTPRGTAVQNGSHVQPQHGAASDVPTTSAAAKPT
ELLAPQKSTRAVPKPPTSQSASVNADSTAPRTPAKAPGDASKAFPFQFGSISPGCMNGMQ
VPARTSSAPPNLDEQKRDQARHDSFRSVAPLPAPSAPKQLPRKDVSPVIQGPVIQANTGE
AHSVPKVKKDVQVSPPPPAGQPQKPSVHPMTGMPMQMPFHQPQLPVQFGGPNQQIQSQGM
TAASLQIPLNLPLSMGNSPQMQQPMYLPSLQHLPMQTQGLMHQAQGLSFPNQMGQLGNMG
ISMTPHYPQQQGGNYGGPRKTPVKITHPETREELKLDKRADSYSDVGSAGPRTHPNVHPK
SQPIPSYAPSHPISFYSPNSYNASSIFYPPQSSVPLTSSQIAANSQASRFNYPATQGPQN
MTFVNPSAHNPIPVNKTGTQIHGVADPPNLERSRDVHNIISSHPSTTVPITVKPITGPSI
GEKVGDSLLSNSSHVVQKGESPKHVRPSGEANLSHPQRDSQSFPQVSLWQMKTSSDSLVS
KSLLVVTEQSVAVSDASCSDGLIPDHLSSVSGSPSEESALVVPNYEGRRRETLVRSNSIK
DHQKKPGKKGYIQPPHEAASESISTSNFPSSALEHGISTNGGVSGAVLAKTTTTHANSEV
VSSFQQSLSSVGDATHDASELKVDSVGEDSTSVSSQICGARIILDTSETVHHARPDEQLD
QETVGIDEQGESRLPEGSKLDNIGGEISSEPILLKSQERTKQIEGEQSGQDSGLKAITTN
DEVLTSKTVQRGLDEPVRDHTEIGRTTDKLEMCSFKVLSSTDGGSSHGEKSSYLDAFSSR
SDSVGSSEVVAIRGISDQLSAHILTPDIAEATSKHEGEGVENIDDLVSFGASGAKDKPIS
DLNRPKSTGKAKKKRKECLLKADAAGSISDLYNAYKGPEEKKETVASTESTESTSSSVHV
KALTDAVELDAPVSEKSRLEKAEPDDWEDAADISTPKLEVSDDGQQIHGILDDHDKDGVG
TMTKKYSRDFLLIFSEQCTDLPHGFEITADIAEAVMSGGFNSSHLVERDSYPSPGRIIDR
LSGGSRIDRRGSGMIEEDRWSKVPGNFGSGRDVRLDSGHGVNAGFRPGSGGNYGVLRNPR
VQTPVQYPGGILHGPSMGSQGGMSRNSPDADRWLRSASIQQRGLIPSPQTPLLIMHRAEK
KYEVGKVTDEEEAKQRQLKGILNKLTPQNFEKLFEQVRAVKIDNAVTLTGVISQIFDKAL
MEPTFCEMYADFCSHLAEELPDFKRVLLNKCQEEFERGEREQEEANKADEEGEIKQSAEE
REEKRVKARRRMLGNIRLIGELYKKKMLTERIMHTCIKKLLGQSQTPDEEDVEALCKLMS
TIGEMIDHPRAKEHMDAYFDRMKMLSTNSNLSTRVRFMLKDAMDLRKNKWQQRRKVEGPK
KIDEVHRDAAQERQAQSSRLSRGLSINQSARRTPMDFGPRGSTVLSSPNAQLGGFRGMST
PVRGLSIQDVRLEDRQSHDTRMPSVPLPQRPSLDDSITLGPQGGLGRGMSIRGPPSMRST
PVADVSPVSPDLRRMAAGLNGYSTLPVRTTYGTREDLVPRYIPDRFAAPAAYESSSSQER
NLSYGNRDPRNPDRSSDRSLAISPPARGQGTALPQNVPSEKVWLEERLRDKSMAAIKEYY
SARDEKEVELCVKELDSPSFHPSMVSLWVADSLERKDMERDLLAKLLIYLSKSGDGVLTQ
AQLIKGFESVLTTLEDAVNDAPRAPEFLGHIFAKVITENVIPLREIGWLIHKGGEEPGHL
LEVGLAADVLGSTLEIIKSEKGDSDFNEIWASSTLRFEDFRPPDPNRSRKLEKFI
NT seq
5748 nt
NT seq
+upstream
nt +downstream
nt
atgtcccataatcaatataggtcggataagagcgagacgacacagtacaggagaaccgat
aggcgatccgcgagctccaaccagcagcggggttcctcaggagcttacggcaagggcggc
gggcccgccccttctccgtcgcacaatctatcctccctccgcagtgttaagaagaataat
aataatgcacaaggaggaggtcaatccagaacaagcttgcccactgtcaattcgtcatca
ttggagtctagtaatgcttctacgccgcgtggtaccgcagtacagaatggttcccatgta
cagccccaacatggagcagcatctgatgtgccgactacaagcgcagctgccaagccgact
gagttgttggctcctcagaaaagcacccgagcggttccaaagcctccgacttctcaatct
gcctctgtgaacgctgactcaacagctcctaggacacctgcaaaggcccctggagatgcg
tctaaggcattcccctttcagtttgggtccataagtcctggctgcatgaatgggatgcag
gttcctgctagaactagctcagcgcccccaaatttggatgaacagaaacgagatcaggca
cgccatgattcttttagatcagtagctccgttgccagctccttctgcacctaagcagtta
ccgagaaaggatgtcagtcctgtaatccaaggtcctgtaatccaagctaatactggggag
gctcattcagtgcccaaggtaaaaaaggatgtgcaagtctcacctccaccaccagcaggc
caaccacagaagccttctgttcatcccatgactgggatgcccatgcaaatgccatttcac
cagccacagcttcctgtgcaattcggaggccccaaccaacagattcaatcccagggaatg
acagctgcttcacttcaaattccattgaatttaccgttgtccatgggaaattcaccccaa
atgcaacagcctatgtatcttcccagtctccaacaccttcctatgcagacacaaggtctt
atgcatcaagcccagggcttgagtttccctaatcaaatgggtcagttgggcaatatggga
atcagcatgactccacattatccccagcaacaggggggaaattatggtggtcctcgtaaa
actcccgtcaagattactcatccagagacacgtgaagagttaaagcttgataaacgggca
gattcctattcagacgtcgggtcagctggtcctaggactcaccctaacgtgcatcctaaa
tcacagcctattccatcatatgcaccttctcatcccattagcttttattctcccaattct
tacaatgccagctctatattttatccaccccagagttctgttcctttaacaagtagccag
atagcagccaattctcaagcttcaagatttaactatccagctacacagggtccccaaaac
atgacttttgtgaatccatcggctcataatcccatacctgtaaataagactgggacccaa
attcatggtgttgcagatccaccaaacttggaacgttctcgtgatgtacataacataatc
tcctctcatccatcaacaacagtaccaattacagttaagccaatcactggtccttctatt
ggagaaaaggttggagactcattgctgtcaaatagctcacatgtcgttcaaaagggtgaa
tctccaaaacatgtgaggccatctggggaagctaacttatcacatcctcaaagggactcg
cagagttttccacaagtctctttgtggcagatgaaaactagctctgactcattggtctcc
aagtcattgctggtggtgactgaacagtcagtggctgtttcagatgctagttgttctgac
ggtctgatacccgatcacttatcttcagtttcaggttcaccatccgaggaatctgctcta
gttgtgcccaattatgaaggcagaagaagggaaacccttgttaggtcaaactcgattaaa
gatcatcaaaagaagccaggcaagaaaggatacatccaaccacctcatgaggctgctagc
gaatctatttcaacatcaaattttccttcttcagctctagagcatggtatatctactaac
ggtggagtttcaggagctgtacttgctaaaacaactactacgcatgcgaatagtgaagtt
gtttcatcatttcagcaatcactgtcatctgttggtgatgctactcatgatgcttctgaa
ttaaaggttgacagtgttggagaggactcaactagtgtctcatctcagatttgtggtgct
cgaatcattcttgatacctctgaaactgttcatcatgctaggccagatgaacaattagac
caagaaacggtgggaatagatgaacaaggagaaagcagattgcctgaagggtccaaactg
gataatattggtggtgagatatcttcagagcctattttgttaaaatctcaggaaagaact
aaacaaattgagggagaacagtctggacaagattctggtctgaaggcaataactacaaat
gatgaggttctaacttcaaagactgtacagagggggctggatgaacctgtgagggatcat
acagaaattggcaggacaactgataaattagaaatgtgcagctttaaggttttgagctcc
acagatggtggaagttctcatggtgagaagagctcatatttggatgccttttcaagcaga
agtgatagtgtaggcagtagtgaagttgttgcaatacgtggtatatcagatcagctgtct
gctcatattctaacccctgatattgcagaagcaacctcaaaacatgaaggggaaggtgta
gagaacattgatgacttggtctcttttggagcatcaggtgccaaggataaacctatttct
gatctgaataggccaaagagtactggtaaagcaaaaaagaagagaaaagaatgtcttcta
aaagctgatgctgctgggtcaatttctgatctttataatgcttataagggcccggaggaa
aagaaagaaactgttgcatctacagaaagtaccgagagcacttcttctagtgtgcatgtg
aaggcacttactgatgctgttgaattagatgccccagtgagcgagaaaagtagactggaa
aaagctgaacctgatgattgggaagacgccgctgacatatcaacaccaaaattagaagtt
tcggatgatggacaacagatacatggaatactggatgatcatgacaaagatggagttgga
actatgaccaaaaagtattccagagatttcctcttgattttttcagagcaatgcactgat
cttccacatggttttgagattacagctgatatagcagaggctgtgatgagtggtggtttc
aatagctctcatcttgttgaacgagattcataccctagtcctgggagaataatagacagg
ctaagtgggggatctcgaatagaccgccgtggtagtggtatgatcgaggaagacaggtgg
agtaaagtacctggtaattttggttcagggcgggatgtgcgtctggattccggccatggg
gttaatgcaggttttcgacctggatcgggtggcaattatggtgttcttcggaacccacgt
gtgcaaacacccgtgcagtatcctggaggtatcctccatgggccatctatgggatctcag
ggcggaatgtctagaaatagtcctgatgctgacaggtggttacgttctgccagtattcaa
cagaggggtttgattccatctcctcagactccattactaattatgcacagagctgagaag
aaatatgaagtgggtaaggtgacggatgaggaagaggcaaagcaaaggcaactgaaaggc
attttaaacaagctcactccgcagaactttgagaaactttttgagcaagtgagagctgtc
aaaattgacaatgctgtcactctaactggtgtcatctcgcagatctttgacaaagctttg
atggagcctactttctgtgagatgtatgctgatttctgtagtcatctggctgaggagttg
cctgatttcaagagagtacttctgaacaagtgccaggaggaatttgagagaggggaaaga
gagcaagaagaagctaataaagctgatgaagagggggagattaaacagtctgcagaggaa
agagaagagaagagagttaaggctcgaagacgaatgctgggtaacattagattgataggg
gagttatacaagaagaaaatgttaactgagcgaataatgcacacgtgcataaagaagttg
ttgggtcagtctcaaactcctgatgaagaagatgttgaagctttgtgcaaattgatgagt
actattggggagatgattgaccatcccagggccaaggagcatatggatgcatattttgat
agaatgaagatgctctctaccaattcgaatttatcaaccagggtcaggttcatgttgaag
gatgcgatggatttgagaaagaataaatggcaacagagaagaaaagttgaagggccgaaa
aagattgatgaagtgcacagagatgctgctcaagaacgacaggcacaatccagtaggttg
agtcgtggtttaagcatcaaccagtcagctagaaggacacctatggattttggtcctaga
gggtcaacagtattgtcttccccaaatgctcagctgggtggtttccgtggaatgtctact
ccagttcgtgggcttagcattcaggatgttcgcttggaggacagacaatctcatgacact
aggatgccgtcagttcccttgcctcagagacccagtcttgatgattctattactttggga
cctcaaggtggtcttgggagaggaatgtcaatcagaggaccgccgtcaatgcgaagtact
ccagtagctgatgtatctccagtctccccagatctcagaagaatggcagctggtttgaat
ggctacagcactttaccagtgcgaacaacttatggcacaagggaggatcttgttccaaga
tatattccggatagatttgcagctccagctgcttatgaatcttcaagttctcaagagcgc
aatttgagttatggtaacagagacccaaggaatccagaccggagttctgatagatctctt
gcaatctcaccacctgcacgagggcagggaacagctcttcctcaaaatgtgccttcagaa
aaagtatggcttgaagaacgccttcgggataagtcaatggcagcaattaaagaatattac
agtgccagagacgagaaagaagttgaactatgtgtaaaagaattggattcaccaagcttc
catccgtcgatggtatcgttatgggttgcagactcattggagaggaaggacatggaaagg
gatcttttggcaaagcttctgatctatctttctaagtccggggatggtgtgttgactcaa
gcccagctcatcaaagggtttgaatctgttctgactactctggaagatgccgtaaatgat
gccccaagagcaccagaatttcttggtcatatctttgccaaagtcattacagaaaatgtg
atccctttgagagagattgggtggttaatacataaagggggagaggagccgggtcatctt
ctagaagttgggcttgcggcagatgttcttggaagcaccttggaaattataaaatccgag
aagggggattctgacttcaatgaaatctgggcaagctccaccttgaggtttgaggatttt
cggcctccagatcctaacaggtcaaggaagttagagaaatttatttag
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integrated database retrieval system
