Carya illinoinensis (pecan): 122292852
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Entry
122292852 CDS
T08745
Name
(RefSeq) recQ-mediated genome instability protein 1
KO
K10990
RecQ-mediated genome instability protein 1
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
122292852
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cill03400
]
122292852
DNA repair and recombination proteins [BR:
cill03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
122292852
FA (Fanconi anemia) pathway
122292852
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Motif
Pfam:
RMI1_C
RMI1_N_C
RMI1_N_N
Motif
Other DBs
NCBI-GeneID:
122292852
NCBI-ProteinID:
XP_042957330
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Position
13:5125662..5130989
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AA seq
574 aa
AA seq
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MPRRRLRLGCSSDEEDDNLQQQLQEEPENENPDPNPNIYLSEPIEISDDDLINVHEDFSR
YSHHPAVTASEHSAQPPPVTPASSSSGEGEGEGCSIGDFLGRLGLRLKTEWLGACLNSLQ
TSVPGFSSLDVAAKSKLCFERFLVSDMNYCGDGVLPQNVDSMHLVDLPGPYVLQVDEIVN
ISCPLRGRYQETPSGIKRCLKLSMTDGVQRVFAMEYRPIQALEVFSPAGQKVIVCNLHVR
HGLLMLVPEAFEVLGGLVEELEAARKRLVDEVNKPPRGKRMRTGSVPTLVTRATLAAWPP
NGVNAAGQNNSSMLQDRTPFPANYQGVTAIPSCTNTSQRTTGESAASTIENAAPSTSPSV
IMGFEEMHIDAAPVSRANTVPNPSPHIVSEVEDIHMVDEVDHPLILSGDQEIPFTYLSSL
SAKLSAMKEKSHSVQGKIKCFLTGVKGFQYKQRTKYELRAYVDDGSLIAEILIDHDVVHK
GIGHSPEEVTAALSSSDKKIVSDMKETLRQFQIFLANFEGTMLIEMNKTSLLPISLEMNQ
GCPESDAWLLLRRLKSLSAQTPQLFPLHPIDVSP
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgccgagacgacgtctcagactaggctgctcctccgatgaagaagacgacaatcttcaa
caacaactacaagaagagcctgaaaacgaaaaccctgatccgaatccgaatatatatctt
tctgaacccatcgaaatctccgacgatgacctcattaacgtccacgaggacttctcccgg
tactctcatcatccggcggtgacggcttccgaacactccgcacaaccgcctccggtgact
cctgcttcgagttcttccggcgagggcgagggcgagggttgttcgattggggattttctt
ggaaggctcgggctgaggttgaagacagagtggctgggtgcttgtttgaactcgctccag
acctccgtgccgggattctcgagcctcgacgtcgcggcgaagtccaagctttgcttcgag
cggtttcttgtttcggatatgaattactgtggggacggtgtgcttcctcagaatgtggat
tcaatgcacctcgtcgatctgccggggccgtacgtattgcaggttgatgagatagttaat
atcagttgtccactcagagggaggtatcaggaaacaccttccgggatcaagaggtgtctc
aagttatccatgacggatggtgttcagcgtgtgttcgccatggaatacaggcctattcaa
gctcttgaagttttttctccagctggacagaaggttatcgtctgtaatctacatgtacgt
catggacttttaatgcttgtccctgaggcttttgaagttctagggggattggttgaggag
ttagaggcagcacgcaagcgtcttgttgatgaagtaaataagccaccaagggggaaaagg
atgaggacaggatctgttcccactttagtaactagagcaactcttgctgcatggccacca
aatggtgttaatgctgccggccaaaacaatagttccatgttacaagatagaactcccttt
ccagcaaattaccaaggtgttactgcgattccatcttgcactaataccagccaaaggact
acaggagagtctgctgcttctaccatagaaaatgctgctcctagcacatcaccttctgtt
attatgggatttgaggagatgcatatagatgccgctcctgttagcagggcaaataccgtg
cctaacccatccccccatatcgtttcggaggtcgaggatattcatatggttgatgaggta
gaccaccccctcatactatctggagaccaggaaatcccattcacttacttatctagtttg
tcagccaagttgtcagcaatgaaggagaaatcacattctgttcagggaaaaattaagtgc
tttttgactggtgtaaagggattccaatataagcagcggacaaagtatgagcttcgggca
tatgttgatgatggtagccttattgctgagattcttattgatcacgatgttgtacataaa
ggaataggtcattctccagaagaggtcactgccgctctttcttcttcagacaagaaaata
gtgagtgacatgaaggagacactcaggcagttccagatcttcttggcaaactttgaggga
acaatgcttatagagatgaataaaacctctctcctcccaatttctcttgagatgaaccag
ggctgtcctgaatctgatgcgtggttgctactcagacgactaaagtccctttctgctcaa
acaccgcaacttttccccttgcatcctattgatgtatccccttaa
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