Carya illinoinensis (pecan): 122292885
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Entry
122292885 CDS
T08745
Name
(RefSeq) transcription elongation factor TFIIS-like
KO
K03145
transcription elongation factor S-II
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cill03021
]
122292885
Transcription machinery [BR:
cill03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
122292885
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIS_M
Zn_ribbon_TFIIS
Med26
Baculo_LEF5_C
Motif
Other DBs
NCBI-GeneID:
122292885
NCBI-ProteinID:
XP_042957365
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All DBs
Position
1:57816457..57819243
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AA seq
380 aa
AA seq
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MERELVELFEAAKKAADAAASADGGAEEIRCLDALHQLKNFPVTYHLLVSTQVGKHLRHL
TRHPRKKIQSFASDLIEIWKDIVIKETNKNRRNESFDDKDSVKVEIVNPETAKVEKDMKT
SVRFSKAESIKVVKTERNGMPSLEKVSRTDAVKTGRKARSVDVGKIEKTDLAENDKLEKV
IKDEKRASGVKKPLVGPGPPKLMSMIKSNDTTRDKVRELLHEALSRVSDEANEDIQDEVN
ACDPIRVAVSVESILFDNWGSSQGAQKAKYRSLMFNLKDAKNPDFRRRVLLGHVKPDWLV
NMSTAEMASDKRQNENRLIEERALFDCERGAPPKETTDQFRCGRCGQRKCTYYQMQTRSA
DEPMTTYVTCVNCNNHWKFC
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atggagagagagctggttgaattgttcgaagctgcgaagaaagctgcagacgctgcggcc
tccgctgatggaggagccgaggaaatccgatgccttgatgccttacaccagctcaagaat
tttcctgtcacttatcatcttcttgtctccactcaggttgggaagcatcttcgacatctc
accaggcatcccaggaagaaaatccaatcatttgcttccgacttgattgagatatggaaa
gacatagtgataaaggagacaaacaaaaatagaagaaatgaaagctttgatgacaaggat
tctgtaaaagttgagatagtaaatcctgagactgccaaggttgagaaggatatgaagaca
tctgtgaggttttcaaaggctgaaagtatcaaggttgtgaaaactgaacgcaatggtatg
ccgagcttggagaaagtttcaaggacagatgctgtcaagacagggagaaaggctcgaagt
gttgatgttggcaagattgagaaaactgatttagctgaaaatgataagcttgaaaaggta
atcaaagacgagaagcgagcttctggagtgaagaaaccattagtaggtcccggtccacca
aagcttatgtcaatgattaaatctaatgataccacacgggacaaagtacgagagcttctt
cacgaagctttgtctagagtgtctgacgaggctaatgaggacattcaggatgaagtgaat
gcatgcgacccgattcgagttgctgtttcagtagagtccattctgtttgataattggggc
agttctcaaggggctcaaaaggccaagtacagatcattaatgtttaaccttaaggacgcc
aaaaacccggactttaggagaagagtacttcttggacatgtcaaaccagactggctcgtc
aacatgagcacagcagaaatggcgagtgacaagaggcaaaatgagaatcgattgattgaa
gagagagctttatttgactgtgagcgtggagcaccacccaaagagacaactgatcaattc
aggtgcggtcgatgcgggcaacgcaaatgcacctactaccaaatgcagacgcgcagtgcg
gatgagcctatgacaacgtacgtaacatgtgttaattgcaataaccattggaaattctgt
tag
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