Carya illinoinensis (pecan): 122292980
Help
Entry
122292980 CDS
T08745
Name
(RefSeq) geranylgeranyl pyrophosphate synthase, chloroplastic-like
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill00900
Terpenoid backbone biosynthesis
cill01100
Metabolic pathways
cill01110
Biosynthesis of secondary metabolites
Module
cill_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
122292980
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
cill01006
]
122292980
Enzymes [BR:
cill01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
122292980
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
122292980
2.5.1.29 geranylgeranyl diphosphate synthase
122292980
Prenyltransferases [BR:
cill01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
122292980
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
polyprenyl_synt
UbiA
Motif
Other DBs
NCBI-GeneID:
122292980
NCBI-ProteinID:
XP_042957507
LinkDB
All DBs
Position
13:12383000..12384216
Genome browser
AA seq
342 aa
AA seq
DB search
MNCVRVGTLVKRYSNSRSRSHFLAFPERRRPISSPSSSPTEEILKPTSFNFKNYVAQKAN
TINRALDAAVPLKDPMEIHKAMRYSLLAGGKRICPLVCIAACELVGGTEPMAMPAACAVE
MIHTMSLIHDDLPCMDNDDLRRGQPTSHKVFGEAVAVLAGDALLALAFEHIASSTVGVPS
ARIVRGIGQLARFIGADGVVGGQVADLTSKGQSEVSLEYLEFIHLRKTAAMLEGTAVLGA
VLGGGSDEEVEKLRTFARYTGLLFQVVDDILDVTKSSEELGKTAGKDLVADKVTYPKLMG
IDKSREFAEKLKEDAQEQLSGFDLDKAAPLVALADFIAHRSN
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgaattgtgtgagagtgggaacattggtcaaacgatattccaactccagatccagatcc
catttcctagcattcccggaacgccgccgtcccatctcctccccctcctcgtctcccacc
gaggaaatcttaaaacccacctccttcaatttcaaaaattacgtggcccaaaaagccaat
accatcaaccgagccctcgacgccgccgttccgctcaaagatcccatggagatccacaag
gccatgcgctactctctcctcgccggtggcaagcgaatctgcccgctcgtttgtatcgcg
gcctgcgagctcgttggcggcaccgaacccatggccatgcccgccgcttgcgccgtcgag
atgatccacaccatgtctctgatccacgacgatcttccttgcatggacaatgatgacctc
cgccgagggcagcccacgagtcacaaggttttcggcgaagccgtggcggttctcgccggc
gatgcactccttgcattagcgttcgagcacatagcctcctccacggtgggcgtgccctct
gcgaggattgtccgtggaattggacagcttgcgaggttcattggcgctgacggggtcgta
ggcggtcaagtagctgatttaacttcaaaggggcagtctgaagtgagtttagagtacctc
gaattcattcatctgcgcaagaccgcagccatgttggaaggcactgcggttcttggagct
gtgctgggtggtggttccgacgaggaggttgagaaactgaggactttcgccaggtacact
ggattactttttcaggtagtggatgacattctcgacgtgacaaaatcgtcggaggaattg
gggaaaacggcggggaaggacttggtggccgataaggttacgtatcccaagctaatgggt
atcgacaaatcgagggagtttgcggagaaattgaaggaggatgcgcaggagcagctctcc
ggctttgatctcgataaggctgcgccgttggttgccctggccgattttattgctcataga
tcaaactag
DBGET
integrated database retrieval system
