KEGG   Carya illinoinensis (pecan): 122293349
Entry
122293349         CDS       T08745                                 
Name
(RefSeq) proliferating cell nuclear antigen
  KO
K04802  proliferating cell nuclear antigen
Organism
cill  Carya illinoinensis (pecan)
Pathway
cill03030  DNA replication
cill03410  Base excision repair
cill03420  Nucleotide excision repair
cill03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cill00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    122293349
   03410 Base excision repair
    122293349
   03420 Nucleotide excision repair
    122293349
   03430 Mismatch repair
    122293349
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cill03032]
    122293349
   03400 DNA repair and recombination proteins [BR:cill03400]
    122293349
DNA replication proteins [BR:cill03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    122293349
DNA repair and recombination proteins [BR:cill03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     122293349
   MMR (mismatch excision repair)
    Other MMR factors
     122293349
  TLS (translesion DNA synthesis) factors
   Other TLS factors
    122293349
SSDB
Motif
Pfam: PCNA_C PCNA_N Rad9 Porin_OmpL1 HTH_ParB_Mtase Ribosomal_L14
Other DBs
NCBI-GeneID: 122293349
NCBI-ProteinID: XP_042957837
LinkDB
Position
14:9686294..9688350
AA seq 266 aa
MLELRLVQGSLLKKVMEAIKDLVNDANFDCSATGFSLQAMDSSHVALVSLLLRSEGFEHY
RCDRNISMGMNLNNMSKMLKCAGNDDIITIKADDGSDTVTFMFESPTQDKISDFEMKLMD
IDSEHLGIPEAEYHAIVRMPSAEFARICKDLSSIGDTVVISVTKEGVKFSTRGDIGTANI
VCRQNTTVDKPEEATIIEMNEPVSLTFALRYMNSFTKATPLSSMVTISLSSELPVVVEYK
IAEMGYIRFYLAPKIEEEEDETRPQA
NT seq 801 nt   +upstreamnt  +downstreamnt
atgctcgaactccggctagtccagggttcgctcctgaagaaagttatggaggccatcaag
gacctggtgaatgatgccaacttcgactgctctgctaccgggttctcgctccaggccatg
gactcgagccacgtcgcgctggtgtctctgctccttagatccgagggcttcgagcactac
cgctgcgaccgcaacatctccatgggcatgaacctcaacaacatgtccaagatgctcaag
tgcgctggcaacgatgacatcatcaccatcaaggccgacgatggcagcgacaccgtcacc
ttcatgtttgagagccctactcaagacaaaatttctgattttgaaatgaaactgatggac
atcgatagtgagcaccttggaattccagaggcagaataccatgctattgttagaatgcct
tcggctgagtttgctaggatttgcaaagatctcagcagcattggtgatactgttgtcatc
tctgtgactaaggaaggtgtgaagttctctacaagaggtgatattggaactgcaaatatt
gtttgcaggcaaaacaccacagtagacaagccagaagaagcaacgatcattgagatgaat
gagccagtatccctgacgtttgcgctgagatacatgaattccttcacaaaggcgacacct
ttatcgagcatggttacaattagcttgtcttcagagctgcctgtcgtggttgaatacaag
attgcagagatgggttatattaggttctacttggctcctaagatagaagaggaggaagac
gagacgaggcctcaagcttag

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