Carya illinoinensis (pecan): 122293577
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Entry
122293577 CDS
T08745
Name
(RefSeq) transcription factor SPEECHLESS-like
KO
K20558
transcription factor SPEECHLESS
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill04016
MAPK signaling pathway - plant
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
122293577
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cill03000
]
122293577
Transcription factors [BR:
cill03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
122293577
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GFIT
Motif
Pfam:
HLH
bHLH-TF_ACT-like_plant
Motif
Other DBs
NCBI-GeneID:
122293577
NCBI-ProteinID:
XP_042958058
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Position
14:12439045..12442668
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AA seq
350 aa
AA seq
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MDYFLSDFYEELEFGDTNFCLAQDHVDDDLFSFFENGLEDMVGFHDLPKTNHEAVLDHFS
KRGRQETTSVPKSKRPKLRAPAAEANPSEEENLLEEQQRMSHIAVERNRRKQMKDSLSVL
RSLMPHFYVKRGDQASIIAGAIDYINEMHQVLKSLEDRKHRKVNYMSEVRISPKLQAQQV
SSPRPSPARSRIKLPPCPRLNLAVSPRTPQPCSPYKPWLHQAVGYLSPATTMATSLEPSL
SRSSSSTTSSINESTITVNELAANSKSPIAEVEVNFSGPNLLLKTVSPRIPGQALKIISA
LEELSLQILHLSIRTVEETVVNSFTIEVGIECQLSAEELAQQIQQTFSVY
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atggattattttttgtctgatttttatgaagaacttgaattcggagatactaacttttgc
ttggctcaagatcatgttgatgatgatcttttcagcttctttgagaatgggttagaagat
atggtggggtttcatgatcttccgaagacaaatcatgaagccgtactggatcacttttcg
aaacgaggccgccaagagacaacatcagtaccaaaaagcaagaggccgaagctgcgtgcg
ccggcagctgaggcgaatccttcggaggaagaaaacctgctggaagagcaacaaaggatg
tctcatattgctgtggagcgcaaccggaggaagcaaatgaaagacagtttgtcggtgttg
aggtcactcatgcctcacttctatgtcaaaagaggagatcaagcatccataattgcaggg
gcgatcgattacatcaacgaaatgcatcaagttctaaaatctctggaggacaggaagcat
cgaaaagttaattacatgagtgaagtccggataagccctaagctgcaggcgcagcaggtt
tcaagtccaagaccctcacctgcacgtagccgtataaagctgccaccatgccctagacta
aacctagccgtgagtcccagaaccccacagccatgtagcccatacaagccatggttgcac
caagcagttggttacctctctccggccaccaccatggctacttcccttgagccatctctt
tcgagatcttcttcatctactacttcctccataaatgagagtactattactgtcaatgag
cttgctgcgaattccaagtctcccatagcagaagtggaggtgaatttttcgggaccaaat
cttcttttgaaaacagtatctcctcggattcctgggcaagccttgaaaataatttccgct
ctcgaagaactctcccttcaaattctccacctgagcataaggactgttgaagaaaccgtg
gtgaactccttcaccattgaggttggaattgaatgtcaacttagcgcagaggaactagca
caacaaattcagcaaacattctcagtctactag
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