Carya illinoinensis (pecan): 122293880
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Entry
122293880 CDS
T08745
Name
(RefSeq) E3 ubiquitin-protein ligase ATL4-like
KO
K10663
E3 ubiquitin-protein ligase ATL4 [EC:
2.3.2.27
]
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cill04121
]
122293880
Enzymes [BR:
cill01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122293880
Ubiquitin system [BR:
cill04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
122293880
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
zf-RING_16
zf-RING_Vps41
Gemini_C4
RINGv
Motif
Other DBs
NCBI-GeneID:
122293880
NCBI-ProteinID:
XP_042958252
LinkDB
All DBs
Position
14:complement(1841466..1843066)
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AA seq
350 aa
AA seq
DB search
MSFSSSSPPLPWPNVLGGTVSGYTTPAPPHSSSSINPSILIIIFILVVTILASFFLCLLL
RHLNRRYIRRLSQAPSTSNSSTRTDSQFLSASRVSPENPNRSFVQSLPLFTFSSIIRRTS
STADCAICLSKFEPNDQLRFLPLCCHAFHAQCIDTWLDSNQTCPLCRSLIFTSDSDLMKA
SLASSTGASVSGESFRLEIGNVSRRRAASEAMETQRSYSIGSFEYLVEEDWEISLSNTHR
RSLSDKEESGAAQDMESTLASEIAGGRSWLKEYVDRISSSLSSRAMSFRSSGRFCSGSSR
RSEITGVGDCDLEANRVGEEISEMFRWLSGYRELGWTGCNALFGYIIYTR
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttttcttcttcttctccaccgcttccatggccgaacgttctcggaggcacggtc
tcgggatacaccacacctgcgccaccgcattcatcgtcatccatcaaccctagcattctt
attatcattttcatcctcgtcgttacaatcctcgcctccttcttcctctgccttctcctc
cgccatctcaaccgccgctacatccgccgcctctctcaggccccttccacttccaactcc
agtactcgcaccgactctcagttcctctccgctagccgcgtctctccggagaatcctaac
cgctcgtttgtccagtccctacctctcttcaccttctcctccatcattcgccgcacatcc
tccactgccgactgcgccatttgcctttccaagtttgagcccaacgaccagctccgtttc
ctccctctctgttgccacgccttccacgctcaatgcattgacacttggctcgactcaaac
cagacttgcccgctttgccgatcattgatctttacttcggactccgaccttatgaaggcc
tcgctcgcttcatccaccggtgcatcagtctccggagagagtttcaggcttgagattgga
aacgtgagccgccggcgagccgcgtcagaagccatggagacgcagaggtcctattccatc
ggatcattcgaatatctcgtggaggaggattgggagatcagtttgagcaatacgcaccgg
aggagcttgtctgacaaggaggagagtggagctgcgcaggacatggaatccactctagct
tccgagatagcgggcggaaggagttggctcaaggagtacgtagataggatctcatcctcg
ctctcatcccgtgcgatgtcatttcggagttccggaaggttttgctctggaagcagtcgc
cggagcgagatcaccggcgtgggcgattgcgacctcgaagcaaaccgagtcggcgaagag
ataagcgagatgttcagatggctctcagggtacagggaattgggttggactggatgtaat
gccttgtttggatacataatttatacgaggtaa
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integrated database retrieval system
