Carya illinoinensis (pecan): 122294050
Help
Entry
122294050 CDS
T08745
Name
(RefSeq) clathrin heavy chain 2-like isoform X1
KO
K04646
clathrin heavy chain
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill04142
Lysosome
cill04144
Endocytosis
cill05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
122294050
04142 Lysosome
122294050
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
122294050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cill04131
]
122294050
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cill04147
]
122294050
Membrane trafficking [BR:
cill04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
122294050
Exosome [BR:
cill04147
]
Exosomal proteins
Proteins found in most exosomes
122294050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
TPR_COPA_B
Clathrin-link
Motif
Other DBs
NCBI-GeneID:
122294050
NCBI-ProteinID:
XP_042958446
LinkDB
All DBs
Position
14:complement(8845819..8858182)
Genome browser
AA seq
1705 aa
AA seq
DB search
MAAPMPAGNAPIIMKETLTLPSIGINPQFITFTHVTMESDKYICVRETAPQNSVVIVDMN
MPTQPLRRPITADSALMNPNSRILALKAQVAGTTQDHLQIFNIELKAKVKSHQMPEQIVF
WKWITPKMLGLVTQTSVYHWSIDGDSEPSKMFERTANLANNQIINYRCDPTEKWLILIGI
APGSPERPQLVKGSMQLFSVDQQRSQALEAHAASFATFKVAGNENPSILICFASKTLNAG
QVTSKLHIIELGAQSGKPSFTKKQADLFFPPDFADDFPVSMQISQKYGLIYVITKLGLLF
VYDLETAAAVYRNRISPDPIFLTTEASSVGGFYAINRRGQVLLATVNEQTIVEFVSESLK
NLELAVNLAKRGNLPGADKMVIQRFQELFTQTKYKEAAELAAESPQGILRTPDTVAKFQS
VPVQAGQTPPLLQYFGTLLTRGKLNAFESLELSRLVVNQNKKNLLENWLAEDKLECSEEL
GDLVKTVDNDLALKIYIKARATPKVVAAFAERREFDKILIYSKQVGYTPDYLFLLQTILR
SDPQGAVNFALMMSQMEGGCPIDYNTITDLFLQRNLIREATAFLLDVLKPNLPEHGHLQT
KVLEINLVTFPNVADAILANGMFSHYDRPRIAQLCEKAGLYLRALQHYTELPDIKRVIVN
THAIEPQSLVEFFGTLSKEWALECMKDLLVVNLRGNLQIIVQTAKEYAEQLGVEACIKLF
DQFKSYEGLYFFLGSYLSSSEDPDIHFKYIEAAAKTGQIKEVERVTRESNFYDAEKTKNF
LMEAKLPDARPLINVCDRFGFVPDLTHYLYTNNMLRYIEGYVQKVNPGNAPLVVGQLLDD
ECPEDFIKGLILSVRSLLPVEPLVEECEKRNRLRLLTQFLEHLVSEGSQDVHVHNALGKI
IIDSNNNPEHFLTTNPYYDSRVVGKYCEKRDPTLAVVAYRRGQCDDELINVTNKNSLFKL
QARYVVERMDGELWEKVLDPENEYRRQIIDQVVSTALPESNSPEQVSAAVKAFMTADLPH
ELIELLEKIVLQNSAFSGNFNLQNLLILTAIKADPTRVMDYINRLDNFDGPAVGEVAVEA
QLYEEAFAIFKKFNLNVQAVNVLLDNIRSIERAVEFAFRVEEDAVWSQVAKAQLRDGLVS
DAIESFIRADDATEFLDVIRAAEDVNVYPDLVRYLLMVRQKTKEPKVDSELIYAYAKIDR
LSDIEEFILMPNVANLQNVGDRLYDEALYEAAKIIYAFISNWAKLAVTLVKLKQFQSAVD
AARKANSSKTWKEVCFACVDAEEFRLAQICGLNIIIQVDDLEEVSEYYQNRGCFNELISL
MESGLGLERAHMGIFTELGVLYARYRHEKLMEHIKLFSTRLNIPKLIRACDEQQHWKELT
YLYIQYDEFDNAATTIMNHSPEAWDHMQFKDVTVKVASVELYYRAVHFYLQEHPDLINDL
LNVLALRVDHTRVVDIMRKAGHLRLVKPYMVAVQSNNVAAVNEALNEIYMEEEDYDRLRE
SIDLHDNFDQISLAQKTEKHELLEMRRVAAYIYKKAGRWKQSIALSKKDNLYKDAMETCS
QSGDRELSEELLVYFIEQGKKECFASCLFVCYDLIRPDVALELAWMNNMIDFAFPYLLQF
IREYTSKVDDLVKYKLETLNEVKAKEEEEKDLVAQQNMYAQLLPLALPAPPMPGMGGGFA
PPPPMGGMGMPPMPAFGMPPMGPTY
NT seq
5118 nt
NT seq
+upstream
nt +downstream
nt
atggctgcccccatgccggccggcaatgcccccatcatcatgaaagagaccttaacgtta
ccgagcattgggattaacccgcagttcattacgttcacgcacgtgaccatggagtcggac
aagtacatctgcgtgagggagacggcgccgcagaacagcgtggtgatcgtcgacatgaac
atgcccacgcagcccttgaggcgacccatcaccgccgactccgcattgatgaaccccaat
tcccgaattctcgctcttaaagctcaagttgcgggaactacacaggatcatttacaaata
ttcaacattgaactaaaagcaaaggtcaagtcgcatcagatgcctgagcagatagtcttt
tggaaatggatcacccccaagatgctaggtctcgtgacacagacctcagtatatcattgg
tcgattgacggtgattctgagccctcgaagatgtttgagcgaactgctaatttggcaaac
aatcaaataatcaactatcgatgtgatcctactgaaaagtggttgattttgattggaatt
gctcctggctcacctgagaggccacaactggtcaaaggaagtatgcagcttttctctgtg
gatcagcaacgtagtcaagctctagaagcacatgctgcatcatttgccacatttaaagtt
gcagggaatgaaaatccttcaattctaatttgttttgcctcaaagaccttgaatgctgga
caggttacatcaaagctgcatattattgaactcggtgcccagtcaggaaaaccgtcattt
accaagaaacaagcagatctattctttcctccagacttcgctgatgactttcctgtgtca
atgcagatatcacaaaaatatggtttaatatacgtgatcacaaagcttggacttcttttc
gtgtatgacctagagacggctgctgcagtgtatagaaatcgaattagtccagatcctata
tttttgacaacagaagcttcatctgttgggggtttttatgccatcaatagacgaggacag
gtgttgcttgccactgtaaatgaacaaaccattgtagaatttgtcagtgaatcgttgaaa
aatttggaacttgctgttaatcttgcgaaaagaggaaaccttcctggtgcagacaagatg
gttatccagcggtttcaggagttgttcactcagactaagtataaggaggctgcagagctt
gctgcagaatctcctcagggaatactccgtacccctgatactgttgctaaatttcagagt
gttcctgtgcaagcagggcaaacaccaccattgttgcagtactttggaaccctgttaacg
agaggaaaactcaatgcgtttgagtcgttggagttgtcacgccttgttgtaaatcagaat
aagaagaatcttttggagaattggttggcagaggacaagctggaatgtagtgaggaactt
ggagatcttgtgaagactgtggataacgatcttgcgctgaagatatatataaaagctagg
gcaactccaaaagttgttgctgcatttgctgagaggcgggagtttgacaagattttaata
tattcaaagcaggttgggtacacacctgattatttgttccttctacaaacaattttgcga
tcagacccccagggggctgttaattttgcattgatgatgtctcaaatggagggaggctgc
ccaattgactataacacgataactgatctgtttcttcagaggaacttaatccgtgaggca
acagctttcttgttggacgtgctgaagcccaatctacctgaacatggacacctgcaaaca
aaggttctggaaattaatcttgtgacatttccaaacgttgcagatgctatattagcgaat
ggcatgttcagtcattatgaccgcccacgtattgcgcagctttgtgaaaaagctggttta
tatttgcgggctctacagcactatactgagttgcctgatattaaacgtgtcattgtgaac
acacatgcaattgaaccacagtctcttgttgagttctttggaactctttccaaagaatgg
gctcttgagtgcatgaaagatcttctggtggtcaatcttagaggcaatcttcagataatt
gtgcagacagccaaagaatatgctgagcagttgggtgttgaggcatgcataaaacttttt
gatcaattcaaatcttatgaaggattgtattttttcttagggtcatatttgagctccagt
gaggatcctgatatccacttcaagtacattgaagctgctgcgaaaactggccaaattaag
gaggtagaacgtgtgactcgggaatcaaacttttatgatgctgaaaagaccaagaacttt
ctgatggaagccaagcttccagatgcacgtcctctgatcaatgtctgtgatcgctttggt
tttgttccggatctcacccattacctgtacacaaataacatgcttcgatatatcgaaggt
tatgttcaaaaggtcaatccaggcaatgctcctctagttgtagggcagctgttagatgac
gagtgccctgaagatttcatcaaaggtctaattctttctgttcgttctcttcttcctgtt
gaacctctagtggaggaatgcgagaagaggaaccgtctccgcttgctgactcagttctta
gagcatcttgtgagtgagggaagccaagatgtacacgttcacaatgctctgggtaaaatc
atcatagacagcaacaataacccagagcattttcttactaccaacccatactatgattct
cgtgttgtgggaaaatattgtgagaaaagggatccaacccttgcagttgttgcgtaccgc
agagggcaatgtgatgatgaacttataaacgtcacaaataaaaattccttgtttaaactg
caggccagatatgtggtggaaaggatggatggtgagctctgggagaaagttcttgatcct
gaaaatgagtacagaagacagataattgaccaagtggtgtctactgctttgcctgaaagc
aatagtcctgagcaagtgtcagcagctgtaaaggcttttatgacagcagatcttccacat
gaactaattgagcttcttgagaagattgtgctccaaaattctgcatttagtggcaacttt
aatcttcagaatctgcttatcctcactgccataaaagctgacccaacaagagttatggat
tatattaataggttggacaatttcgatggacccgctgttggggaggtggctgtggaagct
caattgtatgaagaagcatttgccatctttaaaaagttcaatttgaatgttcaggctgtg
aatgttctcttagataatattcgtagcattgaaagagctgtagagtttgcattccgggta
gaagaagatgctgtttggagccaagtggccaaggctcaactaagagatgggttagtgagc
gatgctattgagtcatttatccgtgcagatgatgccactgaatttttggatgtcataagg
gctgctgaggatgtaaatgtgtaccctgacttggtaaggtaccttttaatggttagacaa
aagaccaaagagcccaaggtggacagtgaactcatttatgcttatgctaagattgatcgg
ctcagtgacattgaagagttcattctcatgccaaatgttgccaatctccagaatgttgga
gaccgcttatatgatgaagccctctatgaggcagcaaagatcatatatgcatttatttct
aactgggctaagctggcagtaactctggtgaagctaaaacagtttcaaagtgctgtggat
gcagctcggaaagccaacagctctaaaacttggaaagaagtttgctttgcctgtgttgat
gctgaggaattccgcttggctcagatatgtggtctgaacatcatcatacaggtggatgat
ttggaagaggtaagtgagtattaccagaaccggggatgctttaatgagctcatttctctc
atggagagtggacttgggttggaacgtgcacatatgggtatctttactgaattgggagtt
ctatatgcaagatatcgtcacgaaaagcttatggagcacatcaaattgttctcaacccgt
ctgaacattccaaagctcatacgagcttgtgatgaacagcagcattggaaggagttaact
tatttgtacatccagtatgatgagtttgacaatgctgcaaccaccataatgaatcactcc
ccagaagcatgggaccacatgcaattcaaggatgtgacagtcaaagttgcaagtgttgag
ctctactatagggctgtgcatttctacttgcaagaacatcctgatcttatcaatgacctt
ctcaatgtgcttgcgcttcgtgtggaccacacccgcgtagtagatataatgcggaaggct
ggtcaccttcgtcttgtgaagccatacatggttgcagttcagagcaacaatgttgctgct
gtaaatgaagctttgaatgagatttatatggaggaggaggactatgacagattacgtgaa
tcaatcgatctgcatgataattttgatcagataagccttgcacagaagactgagaaacat
gagcttcttgagatgaggcgtgttgctgcttatatttataagaaagcaggaagatggaag
cagtctattgcattgtcaaagaaagataatctttacaaggatgccatggaaacatgttca
cagtctggtgaccgtgaactttcagaggagttgcttgtatatttcattgagcagggaaag
aaagagtgttttgcatcgtgcctctttgtttgctatgatttaattcggccagatgttgct
cttgagcttgcatggatgaacaatatgattgattttgcctttccgtacctcttgcagttt
attcgagagtacacaagcaaggtagatgatcttgtcaagtacaaacttgaaactttaaat
gaggtgaaggctaaagaagaggaggagaaggacttggttgctcagcagaacatgtatgcc
cagttgctgcctcttgctttgccggcaccaccaatgccaggaatgggtggaggttttgct
ccaccaccaccaatgggcgggatggggatgcctccaatgccagctttcggtatgccacca
atgggccccacttactga
DBGET
integrated database retrieval system
