Carya illinoinensis (pecan): 122294091
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Entry
122294091 CDS
T08745
Name
(RefSeq) E3 ubiquitin-protein ligase CHIP isoform X1
KO
K09561
STIP1 homology and U-box containing protein 1 [EC:
2.3.2.27
]
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill04120
Ubiquitin mediated proteolysis
cill04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
122294091
04120 Ubiquitin mediated proteolysis
122294091
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
cill03110
]
122294091
04131 Membrane trafficking [BR:
cill04131
]
122294091
04121 Ubiquitin system [BR:
cill04121
]
122294091
Enzymes [BR:
cill01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122294091
Chaperones and folding catalysts [BR:
cill03110
]
Other chaperones and cochaperones
Others
122294091
Membrane trafficking [BR:
cill04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
122294091
Ubiquitin system [BR:
cill04121
]
Ubiquitin ligases (E3)
U-box type E3
122294091
Multi subunit type E3
STUB1-CHIC2 complex
122294091
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
U-box
TPR_11
zf-NOSIP
TPR_2
TPR_1
TPR_16
TPR_17
TPR_9
zf-Nse
ImpA_N
TPR_19
ANAPC3
TPR_14
Motif
Other DBs
NCBI-GeneID:
122294091
NCBI-ProteinID:
XP_042958483
LinkDB
All DBs
Position
14:complement(5791915..5798021)
Genome browser
AA seq
262 aa
AA seq
DB search
MATCTSRKIVLERPSMLIPRRLRYALMFLCIGRIVLCAIASGSIDWPKVEEDCRRAIELD
SNSLKAHYMLGLALLQRQEFVEGIKELQKALDLGRANPESYMVEVIWQEIAKAKYVEWEN
ASSKHSWELQNLKEACEAALKEKHFLDDSQTEGFVDEFATSHLEQLEVLRRVFREAAEAD
TPAEVPDYLCCKITLDILRDPVITPSGVTYEKAVILEHLQKVGKFDPITREPLNQSQLIP
NLAIKEAVQAFLDKHGWAYKMD
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atggcaacttgtacttcaagaaagatcgttttggagcggccatcgatgcttataccgagg
cgattacgctatgccctaatgtttctgtgtattggacgaatcgtgctttgtgccatcgca
agcggaagtattgattggccaaaagtcgaggaggactgtcggagagctattgagcttgac
agcaattctctcaaggctcattatatgttgggacttgccttactacagagacaagaattt
gttgaaggaatcaaagaactgcagaaggctttggatcttggaagagccaaccctgagagc
tacatggtggaggttatctggcaggaaatagccaaagcaaaatacgtggagtgggagaat
gcatcttcaaaacattcgtgggaattgcaaaacttaaaagaagcttgtgaagccgcactt
aaagaaaaacattttcttgatgattctcaaacagaaggtttcgtagatgaatttgctact
tctcacttggaacagttagaggttttaagaagagtttttagagaggctgcagaagctgac
acaccggcagaggtgccagactatctatgttgtaaaataacgcttgatattttgcgtgat
cccgtcatcactccaagtggggttacatacgagaaagcagtgattcttgaacatcttcag
aaggtgggcaagtttgatccaatcactcgtgaaccactaaatcaatcccagctgatacca
aacttggccataaaggaagcagtgcaggcatttctagataaacacggatgggcctacaag
atggactga
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