Carya illinoinensis (pecan): 122294135
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Entry
122294135 CDS
T08745
Name
(RefSeq) DNA-directed RNA polymerase III subunit 2 isoform X1
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
122294135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cill03021
]
122294135
Enzymes [BR:
cill01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
122294135
Transcription machinery [BR:
cill03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
122294135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_2
RNA_pol_Rpb2_5
FtrD-like
Motif
Other DBs
NCBI-GeneID:
122294135
NCBI-ProteinID:
XP_042958557
LinkDB
All DBs
Position
14:complement(887281..920183)
Genome browser
AA seq
1202 aa
AA seq
DB search
MGLKQDSLEEHTKQNKDVGKQLPDYYGVEKQFLAAPIKSAVDKYKLVPEFLKVRGLVKQH
LDSFNYFVNHGIQKIVRANDRIASSVDPSIYIWFKDVRIGEPSMPRDGVSEEINPQMCRL
SDMTYSAPILVSVEYIQGSHTQKIRLEKNEVVIGRMPIMLRSCRCVLYGKDEADLARLGE
CPLDPGGYFIIKGTEKVMLIQEQLSKNRIIIDTDKKGNINASVTSSTEERKSKTVILMEK
GKMYLHLNQFVNKIPILVIMKAMGMESDQEVVQMVGRDPRYSDLLLPSIEECAKKYGVYT
KQQALEHLETKVKKSTYSGASSVKVLFLLCACACVRVRARDFVFVLVHEGRALSILRHIF
LANVPVRQDNFRAKCIYVAVMLRRMIDAVLNKDTMDDKDYVGNKRLELSGQLISLLFEDL
FKSMIEEVKKRMDMNMARLSRSSRFDPLQYVRGDSISAGLERTLSTGNFNVKRFRMDRKG
MTQVLARLSFIGTLGHMTRISPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEACGLVKN
LALMTHVTTDEEERPLISLCYCLGVEDLELLSGEELHAPNSFLVIFNGLILGKHRRPQHF
ATVMRKLRRSGKIGEFVSVFVNEKQRCVYIASDGGRVCRPLVIADKGISRIKEHHMKELL
DGVRTFDDFLRDGLIEYLDVNEENNALIALYEGEATPESTHIEIEPFTILGVCAGLIPFP
HHNQSPRNTYQCAMGKQAMGNIAYNQLSRMDTLLYLLVYPQRPLLTTKTIELVGYDKLGA
GQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKRCSAIRQKYENNTEDRIIRPNR
EGDGAGRMQILDDDGIAAPGEVIRPGDIYINKESPIITRGPMVSPAGLPDRAYRPSIQTF
KGSEGESCVVDRVALFNEKNNNLCIKFLIRHTRRPEVGDKFSSRHGQKGVCGTIIQQEDF
PFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSWGRFRYGSAFGEPSGHADTVEA
LSEALVNKGFSYNGKDFLYSETDENIPSSQILSHATRITGCPLQAYIFMGPIYYQKLKHM
VLDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLMISSDPF
EVQVCRVCGLLGYYNHKLKTAICSSCKNGDNISTMKLPYACKLLIQELQSMNIVPRLKLA
EA
NT seq
3609 nt
NT seq
+upstream
nt +downstream
nt
atgggcctcaagcaggattccttggaagagcatacgaagcaaaacaaagacgttgggaag
cagctgcccgattattatggcgtcgaaaagcaattcctcgccgcccctatcaagtccgct
gttgacaaatacaagcttgttcccgagttcctaaaggtgagaggactggtgaaacaacat
ttggattcttttaattactttgtgaatcacgggatccagaagattgtccgtgctaatgat
cgtatagcatccagtgttgacccgagtatctatatctggttcaaagatgttagaattggt
gagccctcaatgccaagggatggtgtaagcgaagaaattaatccccagatgtgccggtta
tctgatatgacgtattctgctccaattttggtcagtgtagagtacattcaaggaagtcat
acccaaaagataagattggaaaagaatgaggttgttattggaagaatgcctatcatgtta
cggagttgccgctgtgtcttatatggaaaagatgaagctgatcttgcaagacttggtgag
tgtccccttgatcctggaggatattttattatcaaagggacagagaaggtgatgttgata
caggaacagctatcaaagaataggattattattgatactgacaagaagggaaacataaat
gcatctgtgacaagcagtactgaggaacgaaaaagcaaaactgttattttgatggaaaaa
gggaagatgtatttacatttaaatcagtttgtaaacaagattcctattttggtgatcatg
aaggccatgggaatggagagtgatcaagaagttgtacagatggttggaagagatcctcga
tacagtgacctacttttgccatctatagaggaatgtgcaaaaaagtatggtgtatacacg
aaacagcaagccttagagcatcttgagacaaaggtgaagaagtccacttattctggtgct
tcatcggtgaaggtcctctttctcttatgtgcgtgtgcgtgtgtgcgtgtgcgtgcacgg
gactttgtatttgttttggtacatgaaggtagagctttatccattctgcgacatatattt
cttgccaacgttccagtgcgtcaggataattttcgtgcaaaatgtatatatgttgctgta
atgttaagacgcatgatagatgcagtgctgaataaggacacaatggatgacaaggattat
gtgggaaacaaacggttggaattatctggccagttaatttctcttctctttgaggatttg
ttcaagtcgatgattgaagaagttaagaagaggatggacatgaatatggcgagactaagc
aggtctagccgatttgacccgttgcaatatgttcgtggagacagtatttctgctggccta
gagaggactctttctactggtaacttcaatgtcaaacggttcaggatggacaggaaaggc
atgacacaggtgttagctaggctatcctttattgggactttgggacacatgacaagaatc
tcaccacaatttgagaagtccagaaaagtaagtggacctcgagctttgcagcctagtcag
tggggcatgctttgcccatgtgatactcctgaaggtgaagcttgtggactggtaaaaaac
ttggccttgatgactcatgtcacaactgatgaagaggagcgcccattaatttctctgtgc
tactgtttgggagttgaagacttggaactactatctggagaagagcttcatgcgccgaat
tcctttttagttatatttaacgggctgatccttggcaagcatcggaggccacagcatttt
gctacagttatgagaaagttacggagatctggcaaaattggcgagttcgtaagtgtcttt
gtcaatgagaagcagcgctgtgtttacattgcttctgatggaggaagagtttgtcgtcca
cttgtcattgctgacaagggcatatcaaggatcaaagaacatcatatgaaagagttgttg
gatggagttcgcacctttgatgattttttacgagatgggttgattgagtatcttgatgtg
aacgaggaaaacaatgctttgattgctttatatgagggggaggcaacaccagaaagcaca
catattgaaatagagcctttcaccatcttaggtgtttgtgctgggcttattccatttcct
catcataatcagtcacccagaaatacttatcagtgtgcaatggggaagcaagccatgggg
aatattgcatataaccagttgtctcggatggacaccttactttacctactggtgtatcct
caacgacctctgttgacaacaaagacaattgagctggttggatatgataagcttggagca
gggcagaatgccactgttgctgtgatgagctatagtggctatgatatagaggatgcaatt
gtcatgaacaagtcatctttagatcgtggatttggtcgctgtatcgttatgaaaaggtgc
tctgccattagacaaaagtatgaaaataacacagaggacaggataattagacccaataga
gagggagacggtgcaggaaggatgcagatcctagatgatgatgggattgctgcacctggg
gaagtcattcggccaggggacatttatatcaataaggagtcccccatcattacaaggggg
ccaatggtttctccagctggactaccagatagagcatataggcccagtatacaaacattc
aagggatctgaaggagagtcttgtgtggtggatcgagttgctctttttaacgagaagaac
aataatttatgtatcaagtttttaatccgtcatactcgtaggccagaggttggtgacaaa
tttagtagcagacatgggcaaaaaggtgtttgtggcaccattatccagcaggaagacttc
cccttttctgaacgtggcatttgccctgatttaattatgaatcctcatggctttcctagc
cgaatgactgtaggtaagatgatagagcttcttgggggtaaagctggagtttcatggggt
aggtttcgttatggcagtgcctttggggaaccaagtggtcatgcagatacggttgaagct
ctaagtgaagcccttgtgaataaaggttttagctacaatggcaaggacttcctttattca
gagacagatgaaaatattccctcatctcagatcctatcccacgctacacgtatcacaggt
tgcccactgcaagcatatattttcatggggccaatttattaccaaaagttaaaacatatg
gtcctagataaaatgcatgctcgaggtagtgggccccgtgtcatgctaacaagacaacct
actgaagggagagctcgaaatggaggactacgggtaggagaaatggaacgcgattgtctg
attgcgtatggcgctagcatgttaatttttgagcgcctaatgatctctagtgatcctttc
gaagttcaggtttgcagagtatgcggtttgttaggatattacaaccataagctgaaaact
gcaatttgttcatcgtgtaaaaatggggataatatatctactatgaaacttccatatgca
tgcaagctcttaatccaggagctccaatcaatgaatattgttccacgcttaaagctagca
gaggcatga
DBGET
integrated database retrieval system
