KEGG   Carya illinoinensis (pecan): 122294223
Entry
122294223         CDS       T08745                                 
Name
(RefSeq) protein mago nashi homolog
  KO
K12877  protein mago nashi
Organism
cill  Carya illinoinensis (pecan)
Pathway
cill03013  Nucleocytoplasmic transport
cill03015  mRNA surveillance pathway
cill03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cill00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    122294223
  09122 Translation
   03013 Nucleocytoplasmic transport
    122294223
   03015 mRNA surveillance pathway
    122294223
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cill03019]
    122294223
   03041 Spliceosome [BR:cill03041]
    122294223
Messenger RNA biogenesis [BR:cill03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     122294223
Spliceosome [BR:cill03041]
 Complex C
  Other components
   EJC/TREX
    122294223
SSDB
Motif
Pfam: Mago_nashi
Other DBs
NCBI-GeneID: 122294223
NCBI-ProteinID: XP_042958726
LinkDB
Position
14:complement(2127518..2130322)
AA seq 156 aa
MAGAPVGEMEEMEEFYVRYYVGHKGKFGHEFLEFEFRSNGMLRYANNSNYKNDTMIRKQV
YVTPAVLKQCRRIILESEILKEDDNQWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVDV
QSSNDPEGLRIFYYLVQDLKCFVFSLISLHFKIKPI
NT seq 471 nt   +upstreamnt  +downstreamnt
atggcgggagcaccggtaggagagatggaggagatggaggagttctacgtgaggtactac
gtggggcacaaggggaaattcgggcacgagttcctggagtttgagttccgctccaacggc
atgctacgctacgccaacaactccaactacaagaacgacaccatgatccggaagcaggtc
tacgtcactccggctgtcctcaagcagtgccgccgcatcatcctcgagagcgagatcctg
aaggaagacgataaccaatggccagaacctgaccgtattgggaggcaggaacttgagatt
gtgatggggaacgagcatatttcttttaccacttcgaagattggatccctcgttgatgtc
cagagcagtaatgaccccgaaggtcttcgcatattctattaccttgttcaggatctgaag
tgctttgtattctctctcatttcactccatttcaagattaagccaatataa

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