Carya illinoinensis (pecan): 122294375
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Entry
122294375 CDS
T08745
Name
(RefSeq) ruvB-like protein 1
KO
K04499
RuvB-like protein 1 [EC:
5.6.2.4
]
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
122294375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cill03036
]
122294375
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cill03037
]
122294375
Enzymes [BR:
cill01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
122294375
Chromosome and associated proteins [BR:
cill03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
122294375
Chromatin remodeling factors
SRCAP complex
122294375
INO80 complex
122294375
INO80 complex (yeast)
122294375
SWR1 complex
122294375
ASTRA complex
122294375
Cilium and associated proteins [BR:
cill03037
]
Motile cilia and associated proteins
Dynein assembly factors
122294375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TIP49
TIP49_C
AAA
RuvB_N
AAA_22
AAA_5
Mg_chelatase
AAA_16
AAA_18
AAA_25
Cdc6_lid
bpMoxR
AAA_28
DnaB_C
TsaE
ResIII
AAA_7
AAA_11
Parvo_NS1
nSTAND3
NPHP3_N
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
122294375
NCBI-ProteinID:
XP_042959000
LinkDB
All DBs
Position
14:complement(24927253..24933064)
Genome browser
AA seq
458 aa
AA seq
DB search
MDKVRIEEVQSTTKKQRIATHTHIKGLGLEANGRALPLAAGFVGQAEAREASGLVVDMIR
QKKMAGRALLFAGPPGTGKTALALGIAQELGSKVPFCPMVGSEVYSSEVKKTEVLMENFR
RAIGLRIKENKEVYEGEVTELSPEETESMTGGYGKSISHVIIGLKTVKGTKQLKLDPTIY
DALIKEKVAVGDVIYIEANSGAVKRVGRSDAFATEFDLEAEEYVPLPKGEVHKKKEIVQD
VTLHDLDAANARPQGGQDILSLMGQMMKPRKTEITDKLRQEINKVVNRYIDEGVAELVPG
VLFIDEVHMLDMECFSYLNRALESSLSPIVIFATNRGICNVRGTDMSSPHGIPVDLLDRL
VIIRTQNYDIADIIKILALRANVEDLVVDDESLAYLGDIGQRASLRHAVQLLSPASIVAK
MNGRDKIFKGDIEEVSALYLDAKSSAKILQEQQEKYIS
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggataaagtgagaatagaagaggttcagtccacgacaaagaagcagcgcatcgctact
catactcatataaaaggtcttggtctcgaggccaatggaagagcattacctttggctgcc
ggatttgtgggccaggcagaggcaagggaagcatctggtcttgttgttgatatgatacgg
cagaagaagatggctggccgggcacttttattcgctggacctcctggtactggaaaaaca
gccctggcccttggaatagcccaggagcttgggagcaaggtccctttctgcccaatggtt
ggatctgaagtatattcatcagaagtaaagaaaactgaggttttgatggaaaattttcgg
cgggccattggtctacgtatcaaggaaaataaagaagtctatgaaggagaggtcactgaa
ctctccccagaagaaactgagagcatgacaggtggctatggtaagagcattagccatgtg
atcattggattaaaaactgtgaaaggaaccaagcaactgaagttggacccaaccatctat
gatgcgttgattaaggaaaaggtagctgttggtgatgttatatatattgaagcaaatagt
ggggcagtgaagagggtgggaagaagtgatgcgtttgctacagaatttgaccttgaggca
gaagagtatgttccacttcctaaaggagaggttcacaaaaagaaggagatagttcaggat
gtaacactacatgatctagatgctgcaaatgcacgacctcaaggggggcaagatatacta
tctctaatgggtcagatgatgaaacctaggaaaactgaaatcactgacaagttacgacaa
gaaattaataaggttgttaaccggtatattgatgagggtgtagcagaacttgtccctgga
gttctatttattgatgaggtacacatgctggatatggaatgcttttcatacttgaatcgt
gcattagagagctcactatcccctattgtaatctttgctacgaatagaggaatatgcaat
gtaagagggactgatatgagtagtcctcatggcatacctgttgacttgttggaccggttg
gtgattattcgaacacagaactatgacattgctgacattataaagattttagctcttcgt
gcaaacgtggaagacctggttgtagatgatgaaagtctggcttaccttggcgacattgga
caacgggcatcattaaggcatgcagtacagttgttgtcacctgctagtattgtggcaaaa
atgaacggtcgagataaaattttcaagggggatattgaggaagtgagtgcactatatctg
gatgcaaagtcttcagcaaagattcttcaggagcagcaggaaaaatacatttcatga
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