Carya illinoinensis (pecan): 122294489
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Entry
122294489 CDS
T08745
Name
(RefSeq) DNA topoisomerase 6 subunit B isoform X1
KO
K03167
DNA topoisomerase VI subunit B [EC:
5.6.2.2
]
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cill03032
]
122294489
Enzymes [BR:
cill01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
122294489
DNA replication proteins [BR:
cill03032
]
Prokaryotic type
DNA Topoisomerases
122294489
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topo-VIb_trans
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
122294489
NCBI-ProteinID:
XP_042959201
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All DBs
Position
14:30906258..30921863
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AA seq
674 aa
AA seq
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METGGSSESPAEPKKGKTKTPRKPKESLLKQKSPAEFFAENKNIAGFDNPGKCLYTTVRE
LVENSLDSAESISELPLVEVTIEEIRKSQFNSMIGLVDRERVDEELYDDYETAKAREKRL
AKEARAQETQAKNATLGKKVKEPPVSKGMKGRGEASFYKVTCKDNGRGMPHDDIPNMFGR
VLSGTKYGLKQTRGKFGLGAKMALIWSKMSTGLPIEISSSMRGQNYTSFCRLDIDIQRNI
PHIHVHEKRDNMNQWHGAEIQIVIEGNWTTYRSKILHYMRQMAVITPYAQFLFKFVSDTP
EKNATIRFSRRTDVMPPVPLETKHHPSSVDLLLIKRLIAETSKQNLLQFLQHEFVNIPKA
YAERLIGEMGPEFNPKMPIKSLTSQQIVRIHQLFRQAKFDDPSGDCLSPAGEYNLRLGII
KELQPDMVATYSGSAQVFEGHPFIVEAGVSVGGKDVKQGLNIFRFANRIPLLFEQGADVV
TRTALKRINWGSYKINHIQDRIGVFVSIVSTKIPFKGTGKEYIGDDITEISTAVKSAIQQ
CCIQLKSKIVKKMQAREQQERKRNLSKYIPDATGAVYDVLREMAQSHVSKKKRYDDEDAE
VLSKVSARVITKETLREKLAQHVEQVDYEMALEYATQSGVTEEPREAIYIESLEAEKKFI
DLHSPIFVFRLFTN
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atggagaccggaggtagcagcgagagcccagcggagcctaagaaaggcaaaaccaagacc
cccaggaaacctaaggaaagccttctcaagcagaagtctcctgctgagttctttgcagag
aacaagaacattgctgggtttgataaccctggaaaatgcctttacaccactgttagagaa
cttgttgagaactcacttgattctgcagagtccatatccgagcttcccttggtagaagta
acaatcgaagagatacggaaaagccagtttaattccatgatcggtcttgttgatcgggaa
cgagttgatgaggaattatatgatgactatgagacagctaaggctcgagagaaacgttta
gccaaggaagctcgagctcaagaaacacaagcaaagaatgccacccttgggaagaaagtc
aaagagcctccagtttcaaagggtatgaagggtcgaggtgaggcttcgttttacaaggtg
acatgcaaggataatgggagaggaatgccacatgatgacatcccaaatatgtttggacga
gttctatctgggacaaaatatggcttaaagcagacacgtggaaagtttggtcttggtgca
aagatggcattaatttggtctaagatgagtactggacttcctatagagatctcatcatcg
atgaggggccaaaattatacttcattctgcagacttgatatagatattcaacggaatatc
cctcacattcatgtacatgagaaacgggacaacatgaatcagtggcatggagccgaaatt
caaatagtcattgagggaaattggacaacataccgttccaaaatcttgcattacatgcga
caaatggctgttataaccccttatgcccaattcctttttaagtttgtatcagatacacct
gaaaagaatgctaccataagattttctcggagaacagacgtaatgcctccagttcctctt
gagacaaagcaccatccctcctctgttgatttgctactaatcaaacgtctgattgcggaa
acttcaaaacagaaccttttgcagtttctgcagcatgaatttgtgaatatacctaaagct
tatgctgaacgattgattggtgagatgggcccagagtttaaccccaaaatgcctatcaaa
tctctaacatctcaacagatagttcgcattcatcagttgtttcgtcaagctaagtttgat
gaccctagtggtgattgtcttagtcctgcaggtgaatacaatcttcgtcttgggattata
aaggagctgcaaccagacatggtggcaacttattcaggcagtgctcaagtttttgaaggc
cacccgtttattgtggaagctggtgttagcgtgggaggcaaagatgttaagcaaggtttg
aacattttccgatttgcaaatcggattccacttctttttgagcaaggtgctgatgttgtc
actaggactgcccttaagagaatcaattggggtagctacaagatcaaccacatacaagat
agaatcggtgtttttgtaagcattgtgagcaccaaaatcccctttaaaggcactgggaaa
gagtatattggagatgatataactgagatatctactgctgtcaagtctgctattcagcaa
tgttgcatccagctaaaatccaaaatagtgaagaagatgcaggcacgtgagcagcaggag
agaaaacgaaatttaagcaagtatatcccagatgctacaggtgctgtgtatgatgttttg
agagaaatggcgcagtcacatgtgtccaagaagaaacgttatgatgatgaggatgcagaa
gtattaagcaaagtgtctgctcgggtaattacaaaagaaacactgagggaaaagcttgct
caacacgttgaacaggtggactatgagatggcattggagtatgctacacagagtggagtg
actgaagaacccagagaagcgatatatatagagtcactagaggctgaaaagaagttcatc
gacttgcatagtcccatcttcgttttcagacttttcaccaactaa
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