Carya illinoinensis (pecan): 122294538
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Entry
122294538 CDS
T08745
Name
(RefSeq) RGG repeats nuclear RNA binding protein A-like isoform X1
KO
K13199
plasminogen activator inhibitor 1 RNA-binding protein
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cill03041
]
122294538
Spliceosome [BR:
cill03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
122294538
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HABP4_PAI-RBP1
Stm1_N
Motif
Other DBs
NCBI-GeneID:
122294538
NCBI-ProteinID:
XP_042959287
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All DBs
Position
14:complement(2137935..2142411)
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AA seq
371 aa
AA seq
DB search
MATTNPFDLLGDDNAEDPSQLIAAQQKLAAAAAQHKKLAPAAQAKPSAEQQQTKPPPKLP
SRPLPPAEAVREARSEGGRGGGRGGVRGYGGGRGSGGFNHDSANSDSSFSNSGVPAGRGA
VEEGEPGKSTERRGYSGPRGPFRGGRRGGSNNGEAGDGERPRRAFERRSGTGRGNEVKRE
GGGRGNWGTQTDEIVVTEEVVNETEKDVVDEKPAGEEEAADSNKENPANETEDKEPEDKE
MTLEEYEKLLEEKRKALQTLKTEERKVDAKEFESMQQLSSKKDSTDIFIKLGSDKDRRRE
AFEKEEKAKKSVSINEFLKPAEGGRNYGPGGRGRGRGSGSGSRGGFGGSATRNVAAPSIE
DPSHFPTLGAK
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atggcgactaccaaccccttcgatttgttgggcgacgataacgccgaggacccctcgcag
ctgatcgcagctcagcagaagcttgccgccgcagcggctcaacacaagaagctggctccc
gctgcacaggccaagccgtccgctgaacagcagcagaccaagccgccgcctaaactcccc
tccaggcctctgcctccagctgaagctgtgagggaggcaaggagtgaaggcggtcgcgga
ggaggtcgaggtggtgtacgcggatatgggggtggccgaggcagtggtggattcaatcat
gactcagccaacagtgacagctcgttcagcaacagtggagttcctgctggccgaggtgcg
gttgaagaaggagagcctgggaagtcaactgagaggcgtggctacagtggaccacgtggt
ccatttcgtggtggtcgccgtggtggttccaataatggagaagctggtgatggggaacgt
cctcggagagcatttgaacgtcgaagtgggactgggcgcggaaatgaggtcaaacgggaa
ggaggtggtcgtgggaactggggaacccagactgatgaaattgtggtgactgaagaagtt
gtcaatgaaactgagaaggatgtggttgatgaaaagccagccggagaggaagaggcagca
gatagcaacaaggagaatcctgcaaatgaaactgaagataaagaacccgaggataaggag
atgactctggaggaatatgagaaactgctagaagagaagaggaaggccctgcagacactt
aagactgaggaacgaaaggtggatgctaaagagtttgaatccatgcagcagctatcaagc
aagaaggacagtactgacatcttcattaaattgggatccgacaaggataggcggcgagag
gcttttgagaaggaagagaaggcaaaaaagtctgtcagcattaatgagttcttgaagcct
gctgaaggaggaaggaactacggcccaggtggtcgtggtcgtggtcgtggttcaggttca
ggttcaagaggagggtttggtggaagtgcaacgagaaatgtggcagccccatctattgaa
gatcctagtcactttccaaccttaggtgccaagtga
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