Carya illinoinensis (pecan): 122294564
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Entry
122294564 CDS
T08745
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31 homolog
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122294564
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cill03041
]
122294564
Spliceosome [BR:
cill03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
122294564
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
122294564
NCBI-ProteinID:
XP_042959358
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Position
14:complement(25690165..25705345)
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AA seq
485 aa
AA seq
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MATLADSFLADLDELSDNEADVIEEEDVDTGNMEEDVDGEMADIENLNYDDLDSVSKLQK
TQRYVDIMQKVEDALQKGSDISNLGMVLEDDPEYQLIVDCNALSVDIENEIIIIHNFIRD
KYRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAIIMVVSVTASTTSGKP
LPEEILDKTIDACDRALTLDAAKKKVLDFVESRMGYIAPNLSTIVGSAVAAKLMGTAGGL
VALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEIFQSTPPSLRMRACRLLASK
STLAARVDSTRGDPSGNNGRALREEIRKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRR
LRKMKERYAITDMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSIGQSKLAA
KVAKKFKEKNYGSSGASSGLTSSLAFTPVQGIELSNPQAHAHQLGSGTQSTYFSETGTFS
KIKRT
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgctggctgattcttttcttgcagaccttgatgaactatctgacaatgaagct
gatgttattgaggaagaagatgttgatactggaaatatggaagaagatgttgatggggaa
atggcagacatagaaaatcttaactatgatgatctggatagtgtttcgaaattgcagaaa
acccagagatatgttgatattatgcagaaagtggaagatgcactccaaaagggctctgat
atctcaaatcttggaatggttttggaagatgatcctgaatatcagctgattgtggactgt
aatgctttgtcagttgatattgagaatgaaatcattattatccacaattttattcgtgac
aagtacaggttgaaatttccggagcttgaatcacttgtgcatcacccaattgattatgca
cgcgttgttaagaaaattggcaatgaaatggatttgaccctggttgatctggaagggttg
ttaccgtcagctatcattatggtggtgtcagttacagcatcgaccacaagtggcaagcct
cttcctgaagaaattcttgataagaccattgatgcatgtgatcgagctcttactctggat
gcagcaaagaaaaaagtccttgactttgtagaaagtcgaatgggatatattgcaccaaat
ctttctactattgttgggagtgctgttgcagctaaacttatggggactgctggtggtctt
gttgcattagctaagatgcctgcatgtaatgttcagcttcttggtgctaagaaaaagaac
cttgctgggttttccactgcaacatcacaatttcgtgtagggtatattgagcaaacggag
atatttcaatctacacccccttctttgaggatgcgtgcttgccggctcttggcttccaag
tcaacacttgcagcaagagtagattccacaagaggagatccatcagggaacaatggaaga
gctttacgggaagagatccgtaagaaaattgagaagtggcaagagccacctcctgcaaag
caacccaaaccacttccagtgcctgattctgagcctaaaaagaagagaggtggtcgtcga
ctgaggaagatgaaggaaagatatgcaataacagacatgaggaaactcgcaaataggatg
caatttggtgtacctgaagagagttctttaggggatggactgggagagggttatggaatg
cttggtcaggctgggagtggcaagctccgtgtatcaattggtcagagcaaacttgctgca
aaggttgccaagaagtttaaggaaaagaattacggaagcagtggtgcttcctctggattg
acatcaagtttagcgtttacccctgtgcaggggatagaactatcaaatccacaggctcat
gcacaccaacttgggagtggaactcaaagcacgtacttttcggagacaggaacattttca
aagatcaagcggacctga
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