Carya illinoinensis (pecan): 122294828
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Entry
122294828 CDS
T08745
Name
(RefSeq) retinoblastoma-related protein-like
KO
K04681
retinoblastoma-like protein 1
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cill03000
]
122294828
Transcription factors [BR:
cill03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
122294828
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RB_A
RB_B
DUF3452
Rb_C
Motif
Other DBs
NCBI-GeneID:
122294828
NCBI-ProteinID:
XP_042959746
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All DBs
Position
14:complement(848309..856428)
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AA seq
1018 aa
AA seq
DB search
MEDAKPSHATATILHSSSGNMDPAEARFTEFCKDGLSLNEIICTKAMKLLKETKPLLTNS
SVIGNGTPEEAERFWFAFVLYSVKRLSEKNGDSEQLGSDDNGFTLCQILRAAKLTIVDFF
KELPHFVVKVGPILSNLYGADWENRLEAKELQADFVHLSLLSKYYERVYRDLFVTNEANA
DKQSAVTSISGYVSDYHRFGWLLFLALRVHVFSRFKDLVTCTNGLVSVLAILIIHVPVHF
RNFNVHDDRRFVKKDGTRVDILASLSNIFDTSEHELRKTMEKANNILVDILKKTPRPASE
CRSKNMENIDTDGLTYFEDLLEDSSLSSSLGNLERNYDDAIRSKGELDERVFINDEDIKL
VSGSLSGGDVNMSGVKREFDSISSPAKTITNQFSPQCSPASNANGILGGASSKMAATPVS
TAMTTAKWLRTVISPLPSQPSVELERFLASCDRDVTDDVAYRAQVILQAIFPNSGLGERC
VTGNLQSANLMDNIWEEQRKHEALKLYYRVLEAMCRAEAQILHANNLTSLLTNERFHRCM
LACSAELVLATHKTVTMLFPAVLERTGITSFDLSKVIESFIRHEESLPRELRRHLNSLEE
RLLESMVWEKGSSMYNSLIVARPSLSAEINRLGLMAEPMPSLDAISMHNKFPCGGLPPVA
SLQKHETSLGQNGDIRSPKRLCTDYRSVLVERNSFTSPVKDRLLNNIKSKLPPPALQSAF
ASPTRPNPGGGGETCAETGINIFFTKITKLAAVRINGMVERLQLSQQIRENVYSIFQQIL
SQRTSLFFNRHIDQIILCCFYGVAKISQLALTFREIIYNYSKQPQCKPQVFRSVFVDWSL
ARHNGRTSQEHVDIITFYNKIFVPAVKPLLVELSPSGTTTKTNRVPEVNNNDAQCPGSPK
MSPFPSLPDMSPKKVSAAHNVYVSPLRSSKMDALISHSSKSYYACVGESTHAYQSPSKDL
SAINNRLNGNRKLRGTLNFDDVDVGLVSDSMVANSLYLQNGSCTSSLGAPLKTEQPDS
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atggaagacgctaaaccttcgcacgcaacagctacaattttgcattccagtagcggcaat
atggaccccgctgaagctcgattcacagagttctgcaaggatggactgtcattgaatgag
atcatttgtaccaaagctatgaagctgttgaaagaaaccaaacctctcctgactaacagt
tcagttattggaaatggaacgcccgaagaagcagaaaggttttggtttgcatttgtttta
tattctgtgaaaaggctaagtgagaagaatggagatagtgagcagctagggtctgatgat
aatgggtttaccttatgtcagatactgagagcagcaaagctgaccattgtggacttcttt
aaggagcttccgcatttcgttgttaaggtcggtccaattttgagtaatttatacggtgca
gattgggagaacagactagaggcgaaggagttgcaggctgattttgtgcacttgagtctt
cttagcaagtactacgaacgtgtgtaccgggatttgtttgtcacaaatgaagcaaatgct
gataagcagtcagctgttaccagtatatctggttatgtctcagactaccatcggtttgga
tggttgctgtttttggcactccgtgtacatgtgttcagccgttttaaggacttggtgacc
tgcacaaatggtttggtttctgtattggctatcttaattattcacgttcccgttcacttc
agaaacttcaatgtacatgatgatcgacgttttgttaagaaagatgggacaagggtggac
atccttgcatcactttccaacatttttgatacctctgaacatgaattgagaaaaacaatg
gaaaaggccaataatatattagtggatattttgaagaaaacaccacgtccagcatctgag
tgtagaagcaaaaacatggagaacattgatacagatggtttgacatattttgaagaccta
ctggaggactcatccttatcatccagtttaggtaatttggaaaggaattatgatgatgct
attcgtagcaagggcgaactggatgaaagggtgtttattaatgatgaggacatcaaactt
gtttctggaagcttgtctggaggtgatgtgaacatgagtggtgtcaagagagaatttgat
tcaatttcatcaccagccaaaacaattaccaatcaattctctccacagtgctctcctgca
tctaatgcaaatggtattcttggtggtgctagttcaaagatggcagctacacctgtaagc
acagcaatgacaactgcaaagtggcttaggactgtcatctctccacttccatcacaaccc
tcagtagagctggagcgtttcctggcatcatgtgatagggatgtaactgatgatgttgca
tatagggcacaagtaatattgcaggctatatttccaaacagtggtctgggagagcgctgt
gtgactggaaatctgcaaagcgcaaacctcatggacaacatctgggaagaacaaagaaaa
catgaagcactcaaattatattatagggtattggaagcaatgtgtagagcagaggcccaa
atacttcatgcaaataatttgacctctttgttaactaatgagaggttccatagatgtatg
cttgcctgttctgccgaactggttctagcgacacataagactgtcacaatgttgtttcct
gcagtgttggagaggactggcattacatcttttgatcttagcaaggtcatagagagtttc
attagacatgaggaatccctcccgagagaattgaggcgacatctaaactcattggaagaa
cgacttttggagagcatggtatgggaaaagggttcctcaatgtataattctttgatagtc
gcaaggcctagtctctctgcagaaataaatcgtcttgggttaatggcagaaccaatgcca
tctttagatgcaatttccatgcataataaatttccttgtggagggttacctcccgtggct
tctttgcagaaacatgagacttcactaggtcagaatggggatatcaggtctccaaaaaga
ctctgcacagattaccgaagtgtattagtagagcggaattccttcacatcacctgtcaag
gatcgcctcctgaacaacattaaatcgaagctacccccacctgctttgcagtctgcattt
gctagtccaacaaggccaaatccaggtggtggaggggagacgtgtgcagaaactggaatc
aatatattctttaccaagataactaagttggcagctgtcagaatcaatggtatggttgaa
aggctacaactatctcagcagataagagagaatgtctactctatttttcaacaaatccta
agtcagcggacatctctattttttaaccgtcacattgaccagatcatcctctgttgcttc
tatggagttgcaaagatatctcaactcgccctgacctttagggaaattatttacaactat
agcaaacaaccgcaatgtaaaccacaagttttccgcagtgtgtttgttgattggtcatta
gcacggcacaatgggagaacatcacaggaacatgttgatatcattacattttacaataaa
atctttgttcctgctgtaaagcctctgctggttgagcttagcccttctggaacaactaca
aaaactaaccgagttcctgaagtcaacaataatgatgcgcaatgtcctggatcacctaaa
atgtctcctttcccaagtctccctgatatgtcccctaagaaagtatcagcagcgcacaat
gtatacgtctctccattgcgatcgtcaaagatggatgctctaatctcacatagctcaaaa
agttactatgcttgcgttggagagagtactcatgcatatcagagcccttcaaaagacctg
agtgccatcaataaccgcttgaatggcaaccgaaagttaagaggcacccttaacttcgat
gatgttgatgttgggttggttagtgattctatggtggccaacagcctatacctccagaat
gggagttgcacatcctcattaggtgcaccgctgaaaactgagcaacccgactcctaa
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