Carya illinoinensis (pecan): 122294840
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Entry
122294840 CDS
T08745
Name
(RefSeq) protein argonaute 4A-like isoform X1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cill03019
]
122294840
03036 Chromosome and associated proteins [BR:
cill03036
]
122294840
Messenger RNA biogenesis [BR:
cill03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
122294840
Chromosome and associated proteins [BR:
cill03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
122294840
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
122294840
microRNA pathway
RISC loading complex
122294840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
122294840
NCBI-ProteinID:
XP_042959759
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Position
14:19977847..19988063
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AA seq
922 aa
AA seq
DB search
MDSLEPDDKKTTNGDSAQEALPPPPPVIPPDVVLLHAEPEQPPEPVKKKVVRVPIARRGL
GNKGQKIPLLTNHFKVMVSNVDGHFFHYCVTVTYEDGRPVDGKGIGRRVIDRVQETYDTE
LSGKYFAYDGEKSLFTVGPLPRNKLEFTVVLEDVQSNRNNRNSSPDGRGSPNESDRKRLR
RPYQSKTFQVEISFASKIPMQAIANALRGQESENSQEALRVLDIILRQHAAKQGCLLVRQ
SFFHNNPRNFADVGGGVLGCRGFHSSFRTSQGGLSLNIDVSTTMIIQPGPVVDFLIANQN
VRDPYSLDWSKAKRTLKNLRIKTNPSNTEYKITGLSEKPCKEQMFTLKQRNVKDVDGDST
IEVTVYDYFVNHRGIELRYSGDLPCINVGKPKRPTYFPVELCSLVSLQRYTKALSTLQRS
SLVEKSRQKPNERMKVLSEALRSSDYDSEPMLQSCGISISTSFTQVEGRVLPVPRLKVGN
GEDFFPRNGRWNFNNKKLVQPMKIGKWAVVNFSARCDIQGLVRDLIKCGELKGILIDPPF
DVFQENPQSRRAPPVVRVEKMFEEIQSKLPGAPQFLLCLLPERKNSDLYGPWKRKNLAEF
GIVTQCIAPTRVNDQYLTNVLLKINAKLGGLNSVLAVEHSPSIPMVSKAPTIIVGMDVSH
GSPGQSDVPSIAAVVSSRQWPLISKYRASVRTQSPKVEMIDSLFKRVSETEDEGIFRELL
LDFYTSSGKRKPDQIIIFRDGVSESQFNQVLNIELDQIIEACKFLDDKWSPKLVVIVAQK
NHHTKFFQPGSPDNVPPGTIIDNKVCHPRNNDFYLCAHAGMIGTTRPTHYHVLLDDIGFS
TDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAATQIGQFMKFEDMSETSSSHGGLTSV
GAVPVPQLPRLQENVCNSMFFC
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atggattcacttgagccagatgataagaagacaacaaatggagacagtgcacaggaagca
ttgccacctcctccccctgttatcccaccagatgttgttctgctgcatgccgaacctgaa
cagcctcccgaacctgttaagaaaaaagttgtccgagttcctatagctaggcgtggcctt
ggaaacaaagggcaaaaaatacctttgcttactaatcacttcaaagttatggtcagcaat
gttgatggccatttcttccactactgtgttactgtgacatatgaagatggccgtcctgta
gatggcaaaggtattggaagaagggtgattgatagggtgcaggaaacttatgatactgag
ttatctggaaagtattttgcctatgatggggaaaagagtttgtttactgttggcccactg
ccccgcaacaaacttgagtttactgttgtgcttgaggatgtccaatcaaacagaaataac
agaaactctagccctgatggccgtggaagtccaaatgagagtgacagaaagagactgcgg
cgtccataccagtccaagacattccaagtggagattagttttgcttccaaaattcctatg
caggcgattgcgaatgcgctacgtggtcaggagtcagagaactcccaagaagcccttaga
gtgcttgatattattttgaggcagcatgctgctaaacagggctgtctccttgttcgccaa
tcgttctttcacaataatcccagaaattttgcagatgtagggggtggcgttcttggctgc
agaggatttcattcaagttttaggacctcccagggtggcttatccctgaatattgatgta
tcaactaccatgattatacagcctggacctgtggtagattttttaattgccaaccagaat
gtgagggatccctattcccttgattggtctaaggctaaacgaacgctcaaaaatcttaga
attaaaacaaatccttccaatacagagtacaagataactggattgagtgagaaaccatgc
aaagagcaaatgtttacactcaaacagaggaatgtcaaggatgtggatggcgacagtaca
attgaagtgaccgtttatgattattttgttaatcatcgtggtatagaattgcgttattcc
ggagacctaccatgtatcaatgttgggaagccaaagcgtcctacttatttccctgttgag
ctctgttcattggtttccttgcaacgctacacgaaagctctatccacgcttcaaagatct
tctctagtggaaaaatcaagacaaaagccgaatgagagaatgaaggttttgtccgaagct
ttgagaagcagtgattatgattctgaacctatgctacaatcatgtggcatttcgattagt
accagcttcactcaagtggaaggtcgtgttctgccagttccaaggttgaaagtgggaaat
ggggaggatttctttcctaggaatgggagatggaacttcaacaataagaaattagtgcag
ccaatgaagataggaaagtgggcagtcgttaacttctcagcacgttgtgatatacagggt
cttgtacgggatctgattaaatgtggagaactaaaaggaattcttatagatcctccattc
gatgtgtttcaagagaatccccagagtagacgagctccccctgtggttagagtggagaag
atgttcgaggagatacaatcaaaacttcctggtgctccacagtttcttctttgcctgctt
ccagagaggaaaaactctgatctctatgggccatggaaaagaaaaaaccttgctgagttt
ggaatagtcacccagtgtattgctcctacaagggttaatgaccaatatcttaccaatgtc
ctcttaaagatcaatgcaaagctgggtggtttgaactcagtactagcggttgaacactcg
ccttctatccccatggtttccaaggctcccaccatcatagttgggatggatgtgtctcat
ggttctcctgggcagtctgacgtaccatcaattgctgcggtcgtcagctcaaggcagtgg
ccattgatttctaaatatagggcttctgtccggacacagtccccaaaggttgaaatgata
gattctttgttcaagcgagtgtctgaaactgaagatgaaggaatatttagggagcttctc
ctagatttctatacaagttcagggaaacggaagcctgatcagatcataatattcagggat
ggagtcagtgagtctcaattcaaccaagttttgaacattgaactggatcaaataattgag
gcctgcaaatttctcgatgacaagtggtcccccaagttggttgttattgttgcacagaaa
aaccaccatactaaattcttccagcctggttctcctgacaatgttccccctggaactatt
atagataacaaagtttgtcatccgagaaacaacgatttctatctatgtgcacatgctgga
atgattgggaccacaagacccactcattatcacgtcctgttggatgacattggattttcg
acagatgatctgcaggaacttgtgcattctctatcatacgtgtatcaaagaagcaccact
gccatttctgtagttgctccaatatgctatgcacacctggcagccacccagattgggcag
ttcatgaaatttgaagacatgtctgagacgtcttcaagccatggcggattgacatctgtt
ggagctgttcctgtcccgcaactgcccagattacaggagaatgtctgcaactccatgttc
ttttgttga
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